Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_487

Experiment: Bacitracin 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_485 and Ac3H11_486 are separated by 30 nucleotidesAc3H11_486 and Ac3H11_487 are separated by 11 nucleotidesAc3H11_487 and Ac3H11_488 overlap by 9 nucleotidesAc3H11_488 and Ac3H11_489 overlap by 25 nucleotides Ac3H11_485 - GCN5-related N-acetyltransferase, at 183,079 to 183,678 _485 Ac3H11_486 - Molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 183,709 to 184,347 _486 Ac3H11_487 - Molybdenum cofactor biosynthesis protein MoaA, at 184,359 to 185,513 _487 Ac3H11_488 - hypothetical protein, at 185,505 to 185,690 _488 Ac3H11_489 - Response regulator NasT, at 185,666 to 186,520 _489 Position (kb) 184 185 186Strain fitness (log2 ratio) -2 -1 0 1 2 3at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.488 kb on + strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.489 kb on - strand, within Ac3H11_485at 183.508 kb on + strand, within Ac3H11_485at 183.509 kb on - strand, within Ac3H11_485at 183.521 kb on + strand, within Ac3H11_485at 183.521 kb on + strand, within Ac3H11_485at 183.522 kb on - strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.578 kb on + strand, within Ac3H11_485at 183.579 kb on - strand, within Ac3H11_485at 183.579 kb on - strand, within Ac3H11_485at 183.579 kb on - strand, within Ac3H11_485at 183.928 kb on + strand, within Ac3H11_486at 184.121 kb on + strand, within Ac3H11_486at 184.121 kb on + strand, within Ac3H11_486at 184.122 kb on - strand, within Ac3H11_486at 184.166 kb on + strand, within Ac3H11_486at 184.166 kb on + strand, within Ac3H11_486at 184.166 kb on + strand, within Ac3H11_486at 184.372 kb on + strandat 184.372 kb on + strandat 184.372 kb on + strandat 184.372 kb on + strandat 184.372 kb on + strandat 184.373 kb on - strandat 184.373 kb on - strandat 184.373 kb on - strandat 184.373 kb on - strandat 184.438 kb on + strandat 184.528 kb on + strand, within Ac3H11_487at 184.528 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.555 kb on + strand, within Ac3H11_487at 184.556 kb on - strand, within Ac3H11_487at 184.556 kb on - strand, within Ac3H11_487at 184.556 kb on - strand, within Ac3H11_487at 184.675 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.816 kb on + strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 184.817 kb on - strand, within Ac3H11_487at 185.290 kb on + strand, within Ac3H11_487at 185.291 kb on - strand, within Ac3H11_487at 185.291 kb on - strand, within Ac3H11_487at 185.296 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.329 kb on + strand, within Ac3H11_487at 185.330 kb on - strand, within Ac3H11_487at 185.330 kb on - strand, within Ac3H11_487at 185.330 kb on - strand, within Ac3H11_487at 185.688 kb on + strandat 185.816 kb on + strand, within Ac3H11_489at 185.817 kb on - strand, within Ac3H11_489at 185.861 kb on + strand, within Ac3H11_489at 185.861 kb on + strand, within Ac3H11_489at 185.861 kb on + strand, within Ac3H11_489at 185.861 kb on + strand, within Ac3H11_489at 185.861 kb on + strand, within Ac3H11_489at 185.862 kb on - strand, within Ac3H11_489at 185.873 kb on + strand, within Ac3H11_489at 185.873 kb on + strand, within Ac3H11_489at 185.873 kb on + strand, within Ac3H11_489at 185.874 kb on - strand, within Ac3H11_489at 185.874 kb on - strand, within Ac3H11_489at 186.224 kb on + strand, within Ac3H11_489at 186.224 kb on + strand, within Ac3H11_489at 186.224 kb on + strand, within Ac3H11_489at 186.225 kb on - strand, within Ac3H11_489at 186.225 kb on - strand, within Ac3H11_489at 186.488 kb on + strandat 186.488 kb on + strandat 186.496 kb on + strandat 186.496 kb on + strandat 186.496 kb on + strandat 186.496 kb on + strandat 186.497 kb on - strandat 186.497 kb on - strandat 186.497 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml
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183,488 + Ac3H11_485 0.68 +0.2
183,488 + Ac3H11_485 0.68 +0.2
183,488 + Ac3H11_485 0.68 -1.2
183,488 + Ac3H11_485 0.68 +0.5
183,488 + Ac3H11_485 0.68 -0.3
183,488 + Ac3H11_485 0.68 +0.5
183,488 + Ac3H11_485 0.68 +0.1
183,489 - Ac3H11_485 0.68 -0.0
183,489 - Ac3H11_485 0.68 -0.8
183,489 - Ac3H11_485 0.68 -1.3
183,489 - Ac3H11_485 0.68 +0.9
183,489 - Ac3H11_485 0.68 -0.7
183,508 + Ac3H11_485 0.71 +0.5
183,509 - Ac3H11_485 0.72 +0.5
183,521 + Ac3H11_485 0.74 +0.7
183,521 + Ac3H11_485 0.74 +0.4
183,522 - Ac3H11_485 0.74 -0.6
183,578 + Ac3H11_485 0.83 -0.9
183,578 + Ac3H11_485 0.83 -0.1
183,578 + Ac3H11_485 0.83 +1.5
183,578 + Ac3H11_485 0.83 -1.7
183,578 + Ac3H11_485 0.83 -1.1
183,578 + Ac3H11_485 0.83 -0.6
183,578 + Ac3H11_485 0.83 -0.7
183,578 + Ac3H11_485 0.83 -0.0
183,579 - Ac3H11_485 0.83 -0.6
183,579 - Ac3H11_485 0.83 -1.1
183,579 - Ac3H11_485 0.83 +0.0
183,928 + Ac3H11_486 0.34 -1.7
184,121 + Ac3H11_486 0.64 -0.3
184,121 + Ac3H11_486 0.64 -1.6
184,122 - Ac3H11_486 0.65 -1.3
184,166 + Ac3H11_486 0.72 -0.9
184,166 + Ac3H11_486 0.72 +0.4
184,166 + Ac3H11_486 0.72 -0.1
184,372 + +0.4
184,372 + -0.5
184,372 + -0.3
184,372 + +0.5
184,372 + -0.3
184,373 - -1.7
184,373 - +0.8
184,373 - +3.4
184,373 - +0.5
184,438 + +0.9
184,528 + Ac3H11_487 0.15 -2.0
184,528 + Ac3H11_487 0.15 -0.9
184,555 + Ac3H11_487 0.17 +0.7
184,555 + Ac3H11_487 0.17 -0.3
184,555 + Ac3H11_487 0.17 -0.0
184,555 + Ac3H11_487 0.17 -0.0
184,555 + Ac3H11_487 0.17 +0.6
184,555 + Ac3H11_487 0.17 +0.2
184,555 + Ac3H11_487 0.17 -1.3
184,556 - Ac3H11_487 0.17 +0.4
184,556 - Ac3H11_487 0.17 -1.4
184,556 - Ac3H11_487 0.17 +0.7
184,675 + Ac3H11_487 0.27 -0.6
184,816 + Ac3H11_487 0.40 -0.4
184,816 + Ac3H11_487 0.40 +0.5
184,816 + Ac3H11_487 0.40 +0.1
184,816 + Ac3H11_487 0.40 -0.2
184,816 + Ac3H11_487 0.40 -0.9
184,816 + Ac3H11_487 0.40 -0.1
184,817 - Ac3H11_487 0.40 +0.8
184,817 - Ac3H11_487 0.40 -0.2
184,817 - Ac3H11_487 0.40 -0.9
184,817 - Ac3H11_487 0.40 -1.3
184,817 - Ac3H11_487 0.40 -1.1
184,817 - Ac3H11_487 0.40 +0.4
185,290 + Ac3H11_487 0.81 -1.3
185,291 - Ac3H11_487 0.81 -1.0
185,291 - Ac3H11_487 0.81 +1.0
185,296 + Ac3H11_487 0.81 -0.6
185,329 + Ac3H11_487 0.84 -1.9
185,329 + Ac3H11_487 0.84 +0.4
185,329 + Ac3H11_487 0.84 -0.1
185,329 + Ac3H11_487 0.84 -0.1
185,329 + Ac3H11_487 0.84 -0.2
185,330 - Ac3H11_487 0.84 -0.4
185,330 - Ac3H11_487 0.84 -0.1
185,330 - Ac3H11_487 0.84 -0.6
185,688 + -0.2
185,816 + Ac3H11_489 0.18 -0.1
185,817 - Ac3H11_489 0.18 +0.2
185,861 + Ac3H11_489 0.23 +1.5
185,861 + Ac3H11_489 0.23 -0.0
185,861 + Ac3H11_489 0.23 -0.2
185,861 + Ac3H11_489 0.23 +0.8
185,861 + Ac3H11_489 0.23 -0.0
185,862 - Ac3H11_489 0.23 +0.3
185,873 + Ac3H11_489 0.24 +0.6
185,873 + Ac3H11_489 0.24 -1.0
185,873 + Ac3H11_489 0.24 +1.6
185,874 - Ac3H11_489 0.24 +0.2
185,874 - Ac3H11_489 0.24 +1.2
186,224 + Ac3H11_489 0.65 +0.2
186,224 + Ac3H11_489 0.65 +1.1
186,224 + Ac3H11_489 0.65 -0.9
186,225 - Ac3H11_489 0.65 +1.1
186,225 - Ac3H11_489 0.65 +1.9
186,488 + +0.0
186,488 + -0.2
186,496 + -1.6
186,496 + +1.4
186,496 + +0.3
186,496 + -1.1
186,497 - -0.7
186,497 - +0.3
186,497 - -2.0

Or see this region's nucleotide sequence