Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3952 and Ac3H11_3953 are separated by 199 nucleotides Ac3H11_3953 and Ac3H11_3954 are separated by 34 nucleotides
Ac3H11_3952 - Permease of the drug/metabolite transporter (DMT) superfamily, at 175,967 to 176,896
_3952
Ac3H11_3953 - D-galactarate dehydratase (EC 4.2.1.42), at 177,096 to 178,673
_3953
Ac3H11_3954 - hypothetical protein, not 6-phosphogluconolactonase, at 178,708 to 179,739
_3954
Position (kb) 177
178
179 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 176.196 kb on + strand, within Ac3H11_3952 at 176.197 kb on - strand, within Ac3H11_3952 at 176.344 kb on - strand, within Ac3H11_3952 at 176.509 kb on - strand, within Ac3H11_3952 at 176.509 kb on - strand, within Ac3H11_3952 at 176.581 kb on + strand, within Ac3H11_3952 at 176.582 kb on - strand, within Ac3H11_3952 at 176.584 kb on - strand, within Ac3H11_3952 at 176.598 kb on + strand, within Ac3H11_3952 at 176.598 kb on + strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.620 kb on + strand, within Ac3H11_3952 at 176.621 kb on - strand, within Ac3H11_3952 at 176.621 kb on - strand, within Ac3H11_3952 at 176.944 kb on - strand at 176.972 kb on + strand at 177.094 kb on + strand at 177.095 kb on - strand at 177.398 kb on + strand, within Ac3H11_3953 at 177.398 kb on + strand, within Ac3H11_3953 at 177.399 kb on - strand, within Ac3H11_3953 at 177.433 kb on + strand, within Ac3H11_3953 at 177.434 kb on - strand, within Ac3H11_3953 at 177.434 kb on - strand, within Ac3H11_3953 at 177.434 kb on - strand, within Ac3H11_3953 at 177.591 kb on + strand, within Ac3H11_3953 at 178.153 kb on + strand, within Ac3H11_3953 at 178.154 kb on - strand, within Ac3H11_3953 at 178.154 kb on - strand, within Ac3H11_3953 at 178.154 kb on - strand, within Ac3H11_3953 at 178.154 kb on - strand, within Ac3H11_3953 at 178.154 kb on - strand, within Ac3H11_3953 at 178.192 kb on + strand, within Ac3H11_3953 at 178.331 kb on - strand, within Ac3H11_3953 at 178.518 kb on + strand at 178.519 kb on - strand at 178.899 kb on + strand, within Ac3H11_3954 at 178.900 kb on - strand, within Ac3H11_3954 at 178.985 kb on + strand, within Ac3H11_3954 at 178.986 kb on - strand, within Ac3H11_3954 at 179.351 kb on + strand, within Ac3H11_3954 at 179.351 kb on + strand, within Ac3H11_3954 at 179.352 kb on - strand, within Ac3H11_3954 at 179.352 kb on - strand, within Ac3H11_3954 at 179.352 kb on - strand, within Ac3H11_3954 at 179.352 kb on - strand, within Ac3H11_3954 at 179.579 kb on + strand, within Ac3H11_3954 at 179.580 kb on - strand, within Ac3H11_3954 at 179.580 kb on - strand, within Ac3H11_3954
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 176,196 + Ac3H11_3952 0.25 +0.2 176,197 - Ac3H11_3952 0.25 -0.9 176,344 - Ac3H11_3952 0.41 -0.1 176,509 - Ac3H11_3952 0.58 +0.9 176,509 - Ac3H11_3952 0.58 +1.3 176,581 + Ac3H11_3952 0.66 +0.2 176,582 - Ac3H11_3952 0.66 +1.5 176,584 - Ac3H11_3952 0.66 -0.2 176,598 + Ac3H11_3952 0.68 +0.3 176,598 + Ac3H11_3952 0.68 +1.6 176,599 - Ac3H11_3952 0.68 +0.1 176,599 - Ac3H11_3952 0.68 -0.7 176,599 - Ac3H11_3952 0.68 -1.7 176,599 - Ac3H11_3952 0.68 +0.5 176,611 - Ac3H11_3952 0.69 -0.3 176,611 - Ac3H11_3952 0.69 -0.0 176,611 - Ac3H11_3952 0.69 -0.3 176,611 - Ac3H11_3952 0.69 +0.0 176,611 - Ac3H11_3952 0.69 +1.6 176,620 + Ac3H11_3952 0.70 -0.3 176,621 - Ac3H11_3952 0.70 -0.6 176,621 - Ac3H11_3952 0.70 -0.4 176,944 - -0.1 176,972 + +1.3 177,094 + +0.4 177,095 - -0.8 177,398 + Ac3H11_3953 0.19 +0.1 177,398 + Ac3H11_3953 0.19 +0.5 177,399 - Ac3H11_3953 0.19 +0.7 177,433 + Ac3H11_3953 0.21 +0.4 177,434 - Ac3H11_3953 0.21 +0.5 177,434 - Ac3H11_3953 0.21 +1.6 177,434 - Ac3H11_3953 0.21 -0.2 177,591 + Ac3H11_3953 0.31 +0.6 178,153 + Ac3H11_3953 0.67 -0.4 178,154 - Ac3H11_3953 0.67 +0.2 178,154 - Ac3H11_3953 0.67 -3.8 178,154 - Ac3H11_3953 0.67 +0.4 178,154 - Ac3H11_3953 0.67 -1.4 178,154 - Ac3H11_3953 0.67 -0.3 178,192 + Ac3H11_3953 0.69 -0.2 178,331 - Ac3H11_3953 0.78 -0.1 178,518 + -1.4 178,519 - -0.8 178,899 + Ac3H11_3954 0.19 +0.3 178,900 - Ac3H11_3954 0.19 +1.1 178,985 + Ac3H11_3954 0.27 +0.6 178,986 - Ac3H11_3954 0.27 +0.5 179,351 + Ac3H11_3954 0.62 -0.4 179,351 + Ac3H11_3954 0.62 +0.1 179,352 - Ac3H11_3954 0.62 -0.1 179,352 - Ac3H11_3954 0.62 +1.0 179,352 - Ac3H11_3954 0.62 -0.0 179,352 - Ac3H11_3954 0.62 -1.5 179,579 + Ac3H11_3954 0.84 +0.1 179,580 - Ac3H11_3954 0.84 +0.3 179,580 - Ac3H11_3954 0.84 -0.2
Or see this region's nucleotide sequence