Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3951 and Ac3H11_3952 are separated by 9 nucleotides Ac3H11_3952 and Ac3H11_3953 are separated by 199 nucleotides
Ac3H11_3951 - Aldose 1-epimerase (EC 5.1.3.3), at 174,845 to 175,957
_3951
Ac3H11_3952 - Permease of the drug/metabolite transporter (DMT) superfamily, at 175,967 to 176,896
_3952
Ac3H11_3953 - D-galactarate dehydratase (EC 4.2.1.42), at 177,096 to 178,673
_3953
Position (kb) 175
176
177 Strain fitness (log2 ratio) -2
-1
0
1
2 at 175.053 kb on + strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.200 kb on + strand, within Ac3H11_3951 at 175.201 kb on - strand, within Ac3H11_3951 at 175.201 kb on - strand, within Ac3H11_3951 at 175.347 kb on + strand, within Ac3H11_3951 at 175.348 kb on - strand, within Ac3H11_3951 at 175.362 kb on - strand, within Ac3H11_3951 at 175.456 kb on + strand, within Ac3H11_3951 at 175.761 kb on + strand, within Ac3H11_3951 at 175.779 kb on + strand, within Ac3H11_3951 at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.848 kb on + strand at 175.849 kb on - strand at 175.849 kb on - strand at 175.849 kb on - strand at 175.849 kb on - strand at 175.849 kb on - strand at 175.892 kb on - strand at 175.950 kb on + strand at 175.950 kb on + strand at 175.950 kb on + strand at 175.950 kb on + strand at 175.950 kb on + strand at 175.950 kb on + strand at 175.950 kb on + strand at 175.951 kb on - strand at 175.951 kb on - strand at 175.951 kb on - strand at 176.196 kb on + strand, within Ac3H11_3952 at 176.197 kb on - strand, within Ac3H11_3952 at 176.344 kb on - strand, within Ac3H11_3952 at 176.509 kb on - strand, within Ac3H11_3952 at 176.509 kb on - strand, within Ac3H11_3952 at 176.581 kb on + strand, within Ac3H11_3952 at 176.582 kb on - strand, within Ac3H11_3952 at 176.584 kb on - strand, within Ac3H11_3952 at 176.598 kb on + strand, within Ac3H11_3952 at 176.598 kb on + strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.599 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.611 kb on - strand, within Ac3H11_3952 at 176.620 kb on + strand, within Ac3H11_3952 at 176.621 kb on - strand, within Ac3H11_3952 at 176.621 kb on - strand, within Ac3H11_3952 at 176.944 kb on - strand at 176.972 kb on + strand at 177.094 kb on + strand at 177.095 kb on - strand at 177.398 kb on + strand, within Ac3H11_3953 at 177.398 kb on + strand, within Ac3H11_3953 at 177.399 kb on - strand, within Ac3H11_3953 at 177.433 kb on + strand, within Ac3H11_3953 at 177.434 kb on - strand, within Ac3H11_3953 at 177.434 kb on - strand, within Ac3H11_3953 at 177.434 kb on - strand, within Ac3H11_3953 at 177.591 kb on + strand, within Ac3H11_3953
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 175,053 + Ac3H11_3951 0.19 -0.4 175,054 - Ac3H11_3951 0.19 -0.0 175,054 - Ac3H11_3951 0.19 +0.2 175,054 - Ac3H11_3951 0.19 -0.4 175,054 - Ac3H11_3951 0.19 +0.6 175,200 + Ac3H11_3951 0.32 -0.2 175,201 - Ac3H11_3951 0.32 +0.3 175,201 - Ac3H11_3951 0.32 +0.4 175,347 + Ac3H11_3951 0.45 -0.7 175,348 - Ac3H11_3951 0.45 -0.2 175,362 - Ac3H11_3951 0.46 -2.3 175,456 + Ac3H11_3951 0.55 +1.8 175,761 + Ac3H11_3951 0.82 -1.6 175,779 + Ac3H11_3951 0.84 -1.6 175,848 + +0.0 175,848 + -1.4 175,848 + -0.2 175,848 + -2.1 175,848 + -0.1 175,848 + -0.2 175,848 + +0.1 175,848 + -2.2 175,848 + +0.0 175,848 + -0.9 175,849 - -0.6 175,849 - -0.7 175,849 - +0.3 175,849 - +0.5 175,849 - +0.4 175,892 - +1.0 175,950 + +0.4 175,950 + +0.6 175,950 + +0.4 175,950 + +0.5 175,950 + +0.7 175,950 + +0.1 175,950 + +0.2 175,951 - -0.3 175,951 - -0.8 175,951 - +0.8 176,196 + Ac3H11_3952 0.25 +0.2 176,197 - Ac3H11_3952 0.25 -0.9 176,344 - Ac3H11_3952 0.41 -0.1 176,509 - Ac3H11_3952 0.58 +0.9 176,509 - Ac3H11_3952 0.58 +1.3 176,581 + Ac3H11_3952 0.66 +0.2 176,582 - Ac3H11_3952 0.66 +1.5 176,584 - Ac3H11_3952 0.66 -0.2 176,598 + Ac3H11_3952 0.68 +0.3 176,598 + Ac3H11_3952 0.68 +1.6 176,599 - Ac3H11_3952 0.68 +0.1 176,599 - Ac3H11_3952 0.68 -0.7 176,599 - Ac3H11_3952 0.68 -1.7 176,599 - Ac3H11_3952 0.68 +0.5 176,611 - Ac3H11_3952 0.69 -0.3 176,611 - Ac3H11_3952 0.69 -0.0 176,611 - Ac3H11_3952 0.69 -0.3 176,611 - Ac3H11_3952 0.69 +0.0 176,611 - Ac3H11_3952 0.69 +1.6 176,620 + Ac3H11_3952 0.70 -0.3 176,621 - Ac3H11_3952 0.70 -0.6 176,621 - Ac3H11_3952 0.70 -0.4 176,944 - -0.1 176,972 + +1.3 177,094 + +0.4 177,095 - -0.8 177,398 + Ac3H11_3953 0.19 +0.1 177,398 + Ac3H11_3953 0.19 +0.5 177,399 - Ac3H11_3953 0.19 +0.7 177,433 + Ac3H11_3953 0.21 +0.4 177,434 - Ac3H11_3953 0.21 +0.5 177,434 - Ac3H11_3953 0.21 +1.6 177,434 - Ac3H11_3953 0.21 -0.2 177,591 + Ac3H11_3953 0.31 +0.6
Or see this region's nucleotide sequence