Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3937 and Ac3H11_3938 are separated by 68 nucleotides Ac3H11_3938 and Ac3H11_3939 are separated by 103 nucleotides Ac3H11_3939 and Ac3H11_3940 are separated by 233 nucleotides Ac3H11_3940 and Ac3H11_3941 overlap by 4 nucleotides
Ac3H11_3937 - hypothetical protein, at 155,478 to 155,918
_3937
Ac3H11_3938 - hypothetical protein, at 155,987 to 156,631
_3938
Ac3H11_3939 - Inner membrane protein YqiK, at 156,735 to 158,861
_3939
Ac3H11_3940 - hypothetical protein, at 159,095 to 159,268
_3940
Ac3H11_3941 - FIG01123212: hypothetical protein, at 159,265 to 164,895
_3941
Position (kb) 156
157
158
159 Strain fitness (log2 ratio) -2
-1
0
1
2 at 155.964 kb on + strand at 155.964 kb on + strand at 155.964 kb on + strand at 155.964 kb on + strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 155.965 kb on - strand at 156.035 kb on + strand at 156.035 kb on + strand at 156.035 kb on + strand at 156.036 kb on - strand at 156.065 kb on + strand, within Ac3H11_3938 at 156.065 kb on + strand, within Ac3H11_3938 at 156.065 kb on + strand, within Ac3H11_3938 at 156.066 kb on - strand, within Ac3H11_3938 at 156.176 kb on + strand, within Ac3H11_3938 at 156.176 kb on + strand, within Ac3H11_3938 at 156.177 kb on - strand, within Ac3H11_3938 at 156.177 kb on - strand, within Ac3H11_3938 at 156.177 kb on - strand, within Ac3H11_3938 at 156.582 kb on - strand at 156.602 kb on + strand at 156.603 kb on - strand at 156.906 kb on + strand at 156.906 kb on + strand at 156.907 kb on - strand at 156.907 kb on - strand at 157.188 kb on + strand, within Ac3H11_3939 at 157.251 kb on + strand, within Ac3H11_3939 at 157.252 kb on - strand, within Ac3H11_3939 at 157.252 kb on - strand, within Ac3H11_3939 at 157.278 kb on + strand, within Ac3H11_3939 at 157.337 kb on + strand, within Ac3H11_3939 at 157.337 kb on + strand, within Ac3H11_3939 at 158.860 kb on - strand at 158.940 kb on + strand at 159.110 kb on + strand at 159.270 kb on + strand at 159.271 kb on - strand at 159.271 kb on - strand at 159.271 kb on - strand at 159.279 kb on + strand at 159.279 kb on + strand at 159.280 kb on - strand at 159.343 kb on + strand at 159.509 kb on - strand at 159.509 kb on - strand at 159.595 kb on + strand at 159.595 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.724 kb on + strand at 159.725 kb on - strand at 159.725 kb on - strand at 159.725 kb on - strand at 159.730 kb on + strand at 159.730 kb on + strand at 159.731 kb on - strand at 159.731 kb on - strand at 159.731 kb on - strand at 159.731 kb on - strand at 159.733 kb on + strand at 159.734 kb on - strand at 159.734 kb on - strand at 159.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 155,964 + +0.3 155,964 + +0.3 155,964 + +0.6 155,964 + +0.4 155,965 - +0.4 155,965 - -1.1 155,965 - -1.0 155,965 - +0.5 155,965 - -0.7 155,965 - +0.3 155,965 - +1.4 156,035 + +2.6 156,035 + -1.5 156,035 + -1.2 156,036 - +0.6 156,065 + Ac3H11_3938 0.12 -0.0 156,065 + Ac3H11_3938 0.12 -1.0 156,065 + Ac3H11_3938 0.12 -0.0 156,066 - Ac3H11_3938 0.12 -0.1 156,176 + Ac3H11_3938 0.29 -0.4 156,176 + Ac3H11_3938 0.29 -0.4 156,177 - Ac3H11_3938 0.29 -0.2 156,177 - Ac3H11_3938 0.29 -0.9 156,177 - Ac3H11_3938 0.29 -0.7 156,582 - -1.1 156,602 + -0.7 156,603 - -0.3 156,906 + +0.6 156,906 + +0.3 156,907 - +0.2 156,907 - -0.4 157,188 + Ac3H11_3939 0.21 +1.5 157,251 + Ac3H11_3939 0.24 +0.7 157,252 - Ac3H11_3939 0.24 +0.3 157,252 - Ac3H11_3939 0.24 -0.0 157,278 + Ac3H11_3939 0.26 -0.2 157,337 + Ac3H11_3939 0.28 -1.6 157,337 + Ac3H11_3939 0.28 +0.3 158,860 - -1.2 158,940 + -0.8 159,110 + +1.9 159,270 + -0.8 159,271 - +0.2 159,271 - +1.0 159,271 - -1.6 159,279 + +0.1 159,279 + -0.7 159,280 - +1.1 159,343 + -0.4 159,509 - -0.7 159,509 - -0.6 159,595 + +0.0 159,595 + -0.2 159,724 + +1.0 159,724 + -0.0 159,724 + +1.5 159,724 + -1.0 159,724 + +1.3 159,724 + +0.8 159,725 - +0.3 159,725 - -1.6 159,725 - -1.2 159,730 + -0.5 159,730 + -1.9 159,731 - -1.2 159,731 - +0.8 159,731 - +0.0 159,731 - -1.7 159,733 + +0.7 159,734 - -0.1 159,734 - +0.4 159,734 - +0.5
Or see this region's nucleotide sequence