Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1169 and Ac3H11_1170 overlap by 29 nucleotides Ac3H11_1170 and Ac3H11_1171 are separated by 99 nucleotides Ac3H11_1171 and Ac3H11_1172 are separated by 119 nucleotides
Ac3H11_1169 - TPR Domain containing protein, at 4,403 to 7,969
_1169
Ac3H11_1170 - Adenylate cyclase (EC 4.6.1.1), at 7,941 to 9,953
_1170
Ac3H11_1171 - Ribosomal subunit interface protein, at 10,053 to 10,403
_1171
Ac3H11_1172 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 10,523 to 11,488
_1172
Position (kb)
7
8
9
10 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 7.005 kb on - strand, within Ac3H11_1169 at 7.136 kb on + strand, within Ac3H11_1169 at 7.136 kb on + strand, within Ac3H11_1169 at 7.136 kb on + strand, within Ac3H11_1169 at 7.137 kb on - strand, within Ac3H11_1169 at 7.137 kb on - strand, within Ac3H11_1169 at 7.259 kb on + strand, within Ac3H11_1169 at 7.260 kb on - strand, within Ac3H11_1169 at 7.629 kb on - strand at 7.637 kb on + strand at 7.637 kb on + strand at 7.637 kb on + strand at 7.637 kb on + strand at 7.638 kb on - strand at 7.638 kb on - strand at 7.638 kb on - strand at 7.638 kb on - strand at 7.644 kb on - strand at 7.667 kb on + strand at 7.667 kb on + strand at 7.668 kb on - strand at 7.668 kb on - strand at 7.668 kb on - strand at 7.700 kb on + strand at 7.700 kb on + strand at 7.700 kb on + strand at 7.700 kb on + strand at 7.701 kb on - strand at 7.757 kb on + strand at 7.853 kb on + strand at 7.854 kb on - strand at 7.940 kb on + strand at 7.940 kb on + strand at 7.940 kb on + strand at 7.941 kb on - strand at 8.182 kb on + strand, within Ac3H11_1170 at 8.182 kb on + strand, within Ac3H11_1170 at 8.628 kb on + strand, within Ac3H11_1170 at 8.628 kb on + strand, within Ac3H11_1170 at 8.631 kb on + strand, within Ac3H11_1170 at 8.632 kb on - strand, within Ac3H11_1170 at 8.823 kb on + strand, within Ac3H11_1170 at 8.824 kb on - strand at 9.052 kb on - strand, within Ac3H11_1170 at 9.052 kb on - strand, within Ac3H11_1170 at 9.075 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.126 kb on + strand, within Ac3H11_1170 at 9.127 kb on - strand, within Ac3H11_1170 at 9.127 kb on - strand, within Ac3H11_1170 at 9.288 kb on + strand, within Ac3H11_1170 at 9.288 kb on + strand, within Ac3H11_1170 at 9.558 kb on + strand, within Ac3H11_1170 at 9.558 kb on + strand, within Ac3H11_1170 at 9.559 kb on - strand, within Ac3H11_1170 at 9.697 kb on + strand, within Ac3H11_1170 at 9.697 kb on + strand, within Ac3H11_1170 at 9.697 kb on + strand, within Ac3H11_1170 at 9.697 kb on + strand, within Ac3H11_1170 at 9.698 kb on - strand, within Ac3H11_1170 at 9.698 kb on - strand, within Ac3H11_1170 at 9.698 kb on - strand, within Ac3H11_1170 at 9.698 kb on - strand, within Ac3H11_1170 at 9.698 kb on - strand, within Ac3H11_1170 at 9.951 kb on + strand at 9.952 kb on - strand at 9.996 kb on + strand at 10.060 kb on + strand at 10.060 kb on + strand at 10.061 kb on - strand at 10.061 kb on - strand at 10.061 kb on - strand at 10.061 kb on - strand at 10.449 kb on + strand at 10.449 kb on + strand at 10.449 kb on + strand at 10.450 kb on - strand at 10.453 kb on + strand at 10.453 kb on + strand at 10.454 kb on - strand at 10.454 kb on - strand at 10.461 kb on + strand at 10.461 kb on + strand at 10.465 kb on - strand at 10.535 kb on + strand at 10.536 kb on - strand at 10.536 kb on - strand at 10.611 kb on + strand at 10.611 kb on + strand at 10.611 kb on + strand at 10.612 kb on - strand at 10.612 kb on - strand at 10.612 kb on - strand at 10.612 kb on - strand at 10.612 kb on - strand at 10.750 kb on - strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.911 kb on + strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172 at 10.912 kb on - strand, within Ac3H11_1172
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 7,005 - Ac3H11_1169 0.73 +0.5 7,136 + Ac3H11_1169 0.77 +0.1 7,136 + Ac3H11_1169 0.77 +0.9 7,136 + Ac3H11_1169 0.77 -0.8 7,137 - Ac3H11_1169 0.77 -1.5 7,137 - Ac3H11_1169 0.77 +0.9 7,259 + Ac3H11_1169 0.80 -1.4 7,260 - Ac3H11_1169 0.80 +0.0 7,629 - -3.1 7,637 + +1.0 7,637 + +0.7 7,637 + -0.4 7,637 + +0.5 7,638 - -0.1 7,638 - +0.3 7,638 - +0.2 7,638 - -2.5 7,644 - -1.6 7,667 + -2.5 7,667 + -3.5 7,668 - -1.2 7,668 - -0.3 7,668 - -0.4 7,700 + -0.8 7,700 + +0.2 7,700 + -0.4 7,700 + -0.1 7,701 - -1.8 7,757 + +0.7 7,853 + -1.9 7,854 - +0.5 7,940 + -1.6 7,940 + -0.2 7,940 + +1.0 7,941 - +0.4 8,182 + Ac3H11_1170 0.12 +1.2 8,182 + Ac3H11_1170 0.12 -1.0 8,628 + Ac3H11_1170 0.34 +0.1 8,628 + Ac3H11_1170 0.34 -0.6 8,631 + Ac3H11_1170 0.34 -1.6 8,632 - Ac3H11_1170 0.34 -1.0 8,823 + Ac3H11_1170 0.44 +0.3 8,824 - +0.7 9,052 - Ac3H11_1170 0.55 -0.1 9,052 - Ac3H11_1170 0.55 -0.6 9,075 + Ac3H11_1170 0.56 +0.3 9,126 + Ac3H11_1170 0.59 -0.6 9,126 + Ac3H11_1170 0.59 -0.4 9,126 + Ac3H11_1170 0.59 -1.1 9,126 + Ac3H11_1170 0.59 -1.2 9,126 + Ac3H11_1170 0.59 +0.6 9,126 + Ac3H11_1170 0.59 -0.6 9,126 + Ac3H11_1170 0.59 +0.0 9,126 + Ac3H11_1170 0.59 -0.8 9,127 - Ac3H11_1170 0.59 +0.7 9,127 - Ac3H11_1170 0.59 -0.2 9,288 + Ac3H11_1170 0.67 -2.0 9,288 + Ac3H11_1170 0.67 -0.1 9,558 + Ac3H11_1170 0.80 -0.4 9,558 + Ac3H11_1170 0.80 -0.5 9,559 - Ac3H11_1170 0.80 +0.1 9,697 + Ac3H11_1170 0.87 -0.4 9,697 + Ac3H11_1170 0.87 -0.8 9,697 + Ac3H11_1170 0.87 +1.3 9,697 + Ac3H11_1170 0.87 -0.8 9,698 - Ac3H11_1170 0.87 +0.2 9,698 - Ac3H11_1170 0.87 +2.4 9,698 - Ac3H11_1170 0.87 +0.0 9,698 - Ac3H11_1170 0.87 -0.9 9,698 - Ac3H11_1170 0.87 -1.3 9,951 + +1.4 9,952 - +0.6 9,996 + +0.3 10,060 + -0.4 10,060 + +1.7 10,061 - +0.5 10,061 - +0.4 10,061 - +0.5 10,061 - -0.9 10,449 + -0.1 10,449 + +0.0 10,449 + +0.3 10,450 - +0.4 10,453 + -0.9 10,453 + +0.4 10,454 - -0.1 10,454 - +0.9 10,461 + -0.0 10,461 + +0.7 10,465 - +0.0 10,535 + +0.7 10,536 - +0.6 10,536 - +0.5 10,611 + +0.1 10,611 + +0.2 10,611 + +1.5 10,612 - -1.6 10,612 - +0.3 10,612 - -0.3 10,612 - +0.8 10,612 - +1.0 10,750 - Ac3H11_1172 0.23 -0.2 10,911 + Ac3H11_1172 0.40 -0.2 10,911 + Ac3H11_1172 0.40 -0.0 10,911 + Ac3H11_1172 0.40 -0.1 10,911 + Ac3H11_1172 0.40 +1.1 10,911 + Ac3H11_1172 0.40 -1.4 10,911 + Ac3H11_1172 0.40 -0.2 10,911 + Ac3H11_1172 0.40 -1.9 10,912 - Ac3H11_1172 0.40 -0.8 10,912 - Ac3H11_1172 0.40 +0.1 10,912 - Ac3H11_1172 0.40 -0.7 10,912 - Ac3H11_1172 0.40 +0.4 10,912 - Ac3H11_1172 0.40 +0.6 10,912 - Ac3H11_1172 0.40 +1.1 10,912 - Ac3H11_1172 0.40 -0.5 10,912 - Ac3H11_1172 0.40 -0.9 10,912 - Ac3H11_1172 0.40 -0.5 10,912 - Ac3H11_1172 0.40 -1.3
Or see this region's nucleotide sequence