Experiment: Bacitracin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1035 and Ac3H11_1036 are separated by 30 nucleotides Ac3H11_1036 and Ac3H11_1037 overlap by 4 nucleotides Ac3H11_1037 and Ac3H11_1038 are separated by 167 nucleotides
Ac3H11_1035 - Transcriptional regulator, AraC family, at 153,245 to 154,267
_1035
Ac3H11_1036 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 154,298 to 156,409
_1036
Ac3H11_1037 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 156,406 to 156,870
_1037
Ac3H11_1038 - suppressor for copper-sensitivity D, putative, at 157,038 to 157,625
_1038
Position (kb) 154
155
156
157 Strain fitness (log2 ratio) -1
0
1
2 at 153.975 kb on + strand, within Ac3H11_1035 at 153.975 kb on + strand, within Ac3H11_1035 at 153.975 kb on + strand, within Ac3H11_1035 at 153.975 kb on + strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 154.140 kb on + strand, within Ac3H11_1035 at 154.140 kb on + strand, within Ac3H11_1035 at 154.141 kb on - strand, within Ac3H11_1035 at 154.141 kb on - strand, within Ac3H11_1035 at 154.653 kb on - strand, within Ac3H11_1036 at 154.653 kb on - strand, within Ac3H11_1036 at 154.653 kb on - strand, within Ac3H11_1036 at 154.717 kb on - strand, within Ac3H11_1036 at 154.717 kb on - strand, within Ac3H11_1036 at 154.717 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 155.391 kb on + strand, within Ac3H11_1036 at 155.391 kb on + strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.392 kb on - strand, within Ac3H11_1036 at 155.417 kb on + strand, within Ac3H11_1036 at 155.417 kb on + strand, within Ac3H11_1036 at 155.418 kb on - strand, within Ac3H11_1036 at 155.418 kb on - strand, within Ac3H11_1036 at 155.418 kb on - strand, within Ac3H11_1036 at 155.418 kb on - strand, within Ac3H11_1036 at 155.865 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.179 kb on + strand, within Ac3H11_1036 at 156.180 kb on - strand, within Ac3H11_1036 at 156.261 kb on + strand at 156.261 kb on + strand at 156.262 kb on - strand at 156.262 kb on - strand at 156.282 kb on - strand at 157.035 kb on + strand at 157.035 kb on + strand at 157.039 kb on + strand at 157.120 kb on + strand, within Ac3H11_1038 at 157.222 kb on - strand, within Ac3H11_1038 at 157.316 kb on + strand, within Ac3H11_1038 at 157.316 kb on + strand, within Ac3H11_1038 at 157.317 kb on - strand, within Ac3H11_1038 at 157.317 kb on - strand, within Ac3H11_1038 at 157.317 kb on - strand, within Ac3H11_1038
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.016 mg/ml remove 153,975 + Ac3H11_1035 0.71 -1.2 153,975 + Ac3H11_1035 0.71 -0.2 153,975 + Ac3H11_1035 0.71 -0.7 153,975 + Ac3H11_1035 0.71 -0.9 153,976 - Ac3H11_1035 0.71 -0.1 153,976 - Ac3H11_1035 0.71 -0.7 153,976 - Ac3H11_1035 0.71 -0.5 153,976 - Ac3H11_1035 0.71 +1.2 153,976 - Ac3H11_1035 0.71 +1.9 154,140 + Ac3H11_1035 0.87 -0.4 154,140 + Ac3H11_1035 0.87 -0.7 154,141 - Ac3H11_1035 0.88 +0.5 154,141 - Ac3H11_1035 0.88 +2.5 154,653 - Ac3H11_1036 0.17 +0.4 154,653 - Ac3H11_1036 0.17 +1.3 154,653 - Ac3H11_1036 0.17 +0.8 154,717 - Ac3H11_1036 0.20 -0.0 154,717 - Ac3H11_1036 0.20 +0.2 154,717 - Ac3H11_1036 0.20 -0.0 154,732 - Ac3H11_1036 0.21 +0.5 154,732 - Ac3H11_1036 0.21 -0.1 154,732 - Ac3H11_1036 0.21 +0.4 154,732 - Ac3H11_1036 0.21 -1.0 155,391 + Ac3H11_1036 0.52 -1.7 155,391 + Ac3H11_1036 0.52 +0.6 155,392 - Ac3H11_1036 0.52 -0.8 155,392 - Ac3H11_1036 0.52 +0.8 155,392 - Ac3H11_1036 0.52 -1.0 155,392 - Ac3H11_1036 0.52 +0.7 155,392 - Ac3H11_1036 0.52 +0.2 155,392 - Ac3H11_1036 0.52 +0.1 155,392 - Ac3H11_1036 0.52 +1.5 155,392 - Ac3H11_1036 0.52 +0.6 155,417 + Ac3H11_1036 0.53 -1.4 155,417 + Ac3H11_1036 0.53 -0.4 155,418 - Ac3H11_1036 0.53 -0.9 155,418 - Ac3H11_1036 0.53 +1.3 155,418 - Ac3H11_1036 0.53 +0.5 155,418 - Ac3H11_1036 0.53 +0.3 155,865 + Ac3H11_1036 0.74 +0.5 156,179 + Ac3H11_1036 0.89 +1.5 156,179 + Ac3H11_1036 0.89 +0.5 156,179 + Ac3H11_1036 0.89 +0.2 156,179 + Ac3H11_1036 0.89 +0.4 156,180 - Ac3H11_1036 0.89 -0.1 156,261 + +0.6 156,261 + -1.6 156,262 - -0.3 156,262 - -1.1 156,282 - -1.3 157,035 + +0.4 157,035 + -0.1 157,039 + -0.8 157,120 + Ac3H11_1038 0.14 -1.6 157,222 - Ac3H11_1038 0.31 -0.1 157,316 + Ac3H11_1038 0.47 +0.3 157,316 + Ac3H11_1038 0.47 -0.8 157,317 - Ac3H11_1038 0.47 -0.4 157,317 - Ac3H11_1038 0.47 -0.4 157,317 - Ac3H11_1038 0.47 +0.5
Or see this region's nucleotide sequence