Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17470 and AZOBR_RS17475 are separated by 587 nucleotides AZOBR_RS17475 and AZOBR_RS17480 are separated by 71 nucleotides
AZOBR_RS17470: AZOBR_RS17470 - hypothetical protein, at 665,376 to 666,317
_RS17470
AZOBR_RS17475: AZOBR_RS17475 - hypothetical protein, at 666,905 to 668,254
_RS17475
AZOBR_RS17480: AZOBR_RS17480 - hypothetical protein, at 668,326 to 669,906
_RS17480
Position (kb) 666
667
668
669 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 665.969 kb on - strand, within AZOBR_RS17470 at 665.969 kb on - strand, within AZOBR_RS17470 at 666.266 kb on - strand at 666.275 kb on - strand at 666.396 kb on + strand at 666.396 kb on + strand at 666.396 kb on + strand at 666.397 kb on - strand at 666.397 kb on - strand at 666.517 kb on + strand at 666.517 kb on + strand at 666.518 kb on - strand at 666.518 kb on - strand at 666.535 kb on - strand at 666.889 kb on - strand at 666.889 kb on - strand at 666.889 kb on - strand at 667.355 kb on + strand, within AZOBR_RS17475 at 667.355 kb on + strand, within AZOBR_RS17475 at 667.355 kb on + strand, within AZOBR_RS17475 at 667.355 kb on + strand, within AZOBR_RS17475 at 667.355 kb on + strand, within AZOBR_RS17475 at 667.356 kb on - strand, within AZOBR_RS17475 at 667.403 kb on + strand, within AZOBR_RS17475 at 667.403 kb on + strand, within AZOBR_RS17475 at 667.466 kb on + strand, within AZOBR_RS17475 at 667.466 kb on + strand, within AZOBR_RS17475 at 667.467 kb on - strand, within AZOBR_RS17475 at 667.467 kb on - strand, within AZOBR_RS17475 at 667.467 kb on - strand, within AZOBR_RS17475 at 667.467 kb on - strand, within AZOBR_RS17475 at 667.467 kb on - strand, within AZOBR_RS17475 at 667.514 kb on + strand, within AZOBR_RS17475 at 667.515 kb on - strand, within AZOBR_RS17475 at 667.553 kb on + strand, within AZOBR_RS17475 at 667.553 kb on + strand, within AZOBR_RS17475 at 667.554 kb on - strand, within AZOBR_RS17475 at 667.797 kb on + strand, within AZOBR_RS17475 at 667.798 kb on - strand, within AZOBR_RS17475 at 667.893 kb on - strand, within AZOBR_RS17475 at 667.893 kb on - strand, within AZOBR_RS17475 at 668.114 kb on + strand, within AZOBR_RS17475 at 668.114 kb on + strand, within AZOBR_RS17475 at 668.114 kb on + strand, within AZOBR_RS17475 at 668.114 kb on + strand, within AZOBR_RS17475 at 668.115 kb on - strand, within AZOBR_RS17475 at 668.471 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 665,969 - AZOBR_RS17470 0.63 -0.9 665,969 - AZOBR_RS17470 0.63 -0.7 666,266 - +0.0 666,275 - -0.1 666,396 + +0.1 666,396 + -0.4 666,396 + +0.2 666,397 - -0.2 666,397 - +0.8 666,517 + -0.7 666,517 + -0.4 666,518 - -0.3 666,518 - +0.2 666,535 - +0.3 666,889 - -0.0 666,889 - -0.2 666,889 - -0.6 667,355 + AZOBR_RS17475 0.33 -1.8 667,355 + AZOBR_RS17475 0.33 -0.7 667,355 + AZOBR_RS17475 0.33 +0.1 667,355 + AZOBR_RS17475 0.33 -0.5 667,355 + AZOBR_RS17475 0.33 -1.5 667,356 - AZOBR_RS17475 0.33 -1.1 667,403 + AZOBR_RS17475 0.37 -0.6 667,403 + AZOBR_RS17475 0.37 -0.5 667,466 + AZOBR_RS17475 0.42 -3.0 667,466 + AZOBR_RS17475 0.42 -0.6 667,467 - AZOBR_RS17475 0.42 +0.7 667,467 - AZOBR_RS17475 0.42 -1.0 667,467 - AZOBR_RS17475 0.42 -0.9 667,467 - AZOBR_RS17475 0.42 -0.1 667,467 - AZOBR_RS17475 0.42 -0.2 667,514 + AZOBR_RS17475 0.45 -1.7 667,515 - AZOBR_RS17475 0.45 -0.1 667,553 + AZOBR_RS17475 0.48 -0.7 667,553 + AZOBR_RS17475 0.48 -0.5 667,554 - AZOBR_RS17475 0.48 -0.4 667,797 + AZOBR_RS17475 0.66 -0.4 667,798 - AZOBR_RS17475 0.66 +0.1 667,893 - AZOBR_RS17475 0.73 -0.6 667,893 - AZOBR_RS17475 0.73 -1.3 668,114 + AZOBR_RS17475 0.90 -0.2 668,114 + AZOBR_RS17475 0.90 -0.5 668,114 + AZOBR_RS17475 0.90 +0.2 668,114 + AZOBR_RS17475 0.90 +0.2 668,115 - AZOBR_RS17475 0.90 -1.4 668,471 + +0.3
Or see this region's nucleotide sequence