Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20530 and ABZR86_RS20535 are separated by 87 nucleotides ABZR86_RS20535 and ABZR86_RS20540 are separated by 43 nucleotides ABZR86_RS20540 and ABZR86_RS20545 are separated by 192 nucleotides
ABZR86_RS20530: ABZR86_RS20530 - YccS family putative transporter, at 52,572 to 54,725
_RS20530
ABZR86_RS20535: ABZR86_RS20535 - membrane protein, at 54,813 to 55,361
_RS20535
ABZR86_RS20540: ABZR86_RS20540 - 3-oxoacyl-ACP reductase FabG, at 55,405 to 56,133
_RS20540
ABZR86_RS20545: ABZR86_RS20545 - aldo/keto reductase family oxidoreductase, at 56,326 to 57,216
_RS20545
Position (kb) 55
56
57 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 54.619 kb on - strand at 54.858 kb on + strand at 54.858 kb on + strand at 54.859 kb on - strand at 54.859 kb on - strand at 54.859 kb on - strand at 55.000 kb on - strand, within ABZR86_RS20535 at 55.036 kb on + strand, within ABZR86_RS20535 at 55.037 kb on - strand, within ABZR86_RS20535 at 55.037 kb on - strand, within ABZR86_RS20535 at 55.102 kb on - strand, within ABZR86_RS20535 at 55.171 kb on - strand, within ABZR86_RS20535 at 55.171 kb on - strand, within ABZR86_RS20535 at 55.171 kb on - strand, within ABZR86_RS20535 at 55.173 kb on - strand, within ABZR86_RS20535 at 55.272 kb on + strand, within ABZR86_RS20535 at 55.273 kb on - strand, within ABZR86_RS20535 at 55.290 kb on + strand, within ABZR86_RS20535 at 55.291 kb on - strand, within ABZR86_RS20535 at 55.483 kb on + strand, within ABZR86_RS20540 at 55.484 kb on - strand, within ABZR86_RS20540 at 55.750 kb on + strand, within ABZR86_RS20540 at 55.750 kb on + strand, within ABZR86_RS20540 at 55.751 kb on - strand, within ABZR86_RS20540 at 55.751 kb on - strand, within ABZR86_RS20540 at 55.751 kb on - strand, within ABZR86_RS20540 at 55.861 kb on + strand, within ABZR86_RS20540 at 55.861 kb on + strand, within ABZR86_RS20540 at 55.861 kb on + strand, within ABZR86_RS20540 at 55.861 kb on + strand, within ABZR86_RS20540 at 55.861 kb on + strand, within ABZR86_RS20540 at 55.862 kb on - strand, within ABZR86_RS20540 at 55.862 kb on - strand, within ABZR86_RS20540 at 55.862 kb on - strand, within ABZR86_RS20540 at 55.862 kb on - strand, within ABZR86_RS20540 at 56.089 kb on + strand at 56.089 kb on + strand at 56.090 kb on - strand at 56.283 kb on + strand at 56.283 kb on + strand at 56.294 kb on + strand at 56.482 kb on + strand, within ABZR86_RS20545 at 56.482 kb on + strand, within ABZR86_RS20545 at 56.483 kb on - strand, within ABZR86_RS20545 at 56.483 kb on - strand, within ABZR86_RS20545 at 56.491 kb on + strand, within ABZR86_RS20545 at 56.492 kb on - strand, within ABZR86_RS20545 at 56.492 kb on - strand, within ABZR86_RS20545 at 56.617 kb on + strand, within ABZR86_RS20545 at 56.617 kb on + strand, within ABZR86_RS20545 at 56.636 kb on - strand, within ABZR86_RS20545 at 56.676 kb on + strand, within ABZR86_RS20545 at 56.717 kb on - strand, within ABZR86_RS20545
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 54,619 - +0.4 54,858 + +0.0 54,858 + -0.2 54,859 - -0.2 54,859 - -0.7 54,859 - -0.9 55,000 - ABZR86_RS20535 0.34 +0.1 55,036 + ABZR86_RS20535 0.41 +0.1 55,037 - ABZR86_RS20535 0.41 -0.4 55,037 - ABZR86_RS20535 0.41 -0.3 55,102 - ABZR86_RS20535 0.53 -0.2 55,171 - ABZR86_RS20535 0.65 +0.0 55,171 - ABZR86_RS20535 0.65 -0.1 55,171 - ABZR86_RS20535 0.65 +0.4 55,173 - ABZR86_RS20535 0.66 -0.2 55,272 + ABZR86_RS20535 0.84 +1.2 55,273 - ABZR86_RS20535 0.84 -2.1 55,290 + ABZR86_RS20535 0.87 -0.8 55,291 - ABZR86_RS20535 0.87 -0.3 55,483 + ABZR86_RS20540 0.11 -0.5 55,484 - ABZR86_RS20540 0.11 -1.3 55,750 + ABZR86_RS20540 0.47 -0.5 55,750 + ABZR86_RS20540 0.47 -0.7 55,751 - ABZR86_RS20540 0.47 -1.7 55,751 - ABZR86_RS20540 0.47 -1.5 55,751 - ABZR86_RS20540 0.47 -0.3 55,861 + ABZR86_RS20540 0.63 -1.2 55,861 + ABZR86_RS20540 0.63 +0.2 55,861 + ABZR86_RS20540 0.63 -1.7 55,861 + ABZR86_RS20540 0.63 -0.6 55,861 + ABZR86_RS20540 0.63 -0.7 55,862 - ABZR86_RS20540 0.63 -0.5 55,862 - ABZR86_RS20540 0.63 -0.5 55,862 - ABZR86_RS20540 0.63 -2.8 55,862 - ABZR86_RS20540 0.63 -0.6 56,089 + -1.1 56,089 + -1.0 56,090 - -0.3 56,283 + -0.2 56,283 + +0.1 56,294 + +0.9 56,482 + ABZR86_RS20545 0.18 -0.6 56,482 + ABZR86_RS20545 0.18 +0.2 56,483 - ABZR86_RS20545 0.18 -0.3 56,483 - ABZR86_RS20545 0.18 +0.1 56,491 + ABZR86_RS20545 0.19 +0.5 56,492 - ABZR86_RS20545 0.19 -0.2 56,492 - ABZR86_RS20545 0.19 -0.3 56,617 + ABZR86_RS20545 0.33 -0.2 56,617 + ABZR86_RS20545 0.33 +0.5 56,636 - ABZR86_RS20545 0.35 -0.1 56,676 + ABZR86_RS20545 0.39 +0.9 56,717 - ABZR86_RS20545 0.44 +0.0
Or see this region's nucleotide sequence