Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19260 and ABZR86_RS19265 are separated by 133 nucleotides ABZR86_RS19265 and ABZR86_RS19270 are separated by 10 nucleotides ABZR86_RS19270 and ABZR86_RS19275 are separated by 134 nucleotides
ABZR86_RS19260: ABZR86_RS19260 - filamentous hemagglutinin N-terminal domain-containing protein, at 309,073 to 311,274
_RS19260
ABZR86_RS19265: ABZR86_RS19265 - YbdD/YjiX family protein, at 311,408 to 311,602
_RS19265
ABZR86_RS19270: ABZR86_RS19270 - carbon starvation CstA family protein, at 311,613 to 313,688
_RS19270
ABZR86_RS19275: ABZR86_RS19275 - hybrid sensor histidine kinase/response regulator, at 313,823 to 317,335
_RS19275
Position (kb) 311
312
313
314 Strain fitness (log2 ratio) -2
-1
0
1
2 at 310.624 kb on + strand, within ABZR86_RS19260 at 310.625 kb on - strand, within ABZR86_RS19260 at 310.625 kb on - strand, within ABZR86_RS19260 at 310.636 kb on + strand, within ABZR86_RS19260 at 310.637 kb on - strand, within ABZR86_RS19260 at 310.637 kb on - strand, within ABZR86_RS19260 at 310.648 kb on + strand, within ABZR86_RS19260 at 310.648 kb on + strand, within ABZR86_RS19260 at 310.648 kb on + strand, within ABZR86_RS19260 at 310.648 kb on + strand, within ABZR86_RS19260 at 310.648 kb on + strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.649 kb on - strand, within ABZR86_RS19260 at 310.735 kb on + strand, within ABZR86_RS19260 at 311.083 kb on - strand at 311.182 kb on + strand at 311.182 kb on + strand at 311.183 kb on - strand at 311.183 kb on - strand at 311.183 kb on - strand at 311.183 kb on - strand at 311.217 kb on + strand at 311.240 kb on - strand at 311.272 kb on + strand at 311.273 kb on - strand at 311.273 kb on - strand at 311.273 kb on - strand at 311.273 kb on - strand at 311.273 kb on - strand at 311.273 kb on - strand at 311.436 kb on + strand, within ABZR86_RS19265 at 311.436 kb on + strand, within ABZR86_RS19265 at 311.437 kb on - strand, within ABZR86_RS19265 at 311.437 kb on - strand, within ABZR86_RS19265 at 311.472 kb on + strand, within ABZR86_RS19265 at 311.472 kb on + strand, within ABZR86_RS19265 at 311.473 kb on - strand, within ABZR86_RS19265 at 311.520 kb on + strand, within ABZR86_RS19265 at 311.520 kb on + strand, within ABZR86_RS19265 at 311.520 kb on + strand, within ABZR86_RS19265 at 311.520 kb on + strand, within ABZR86_RS19265 at 311.520 kb on + strand, within ABZR86_RS19265 at 311.520 kb on + strand, within ABZR86_RS19265 at 311.530 kb on - strand, within ABZR86_RS19265 at 311.530 kb on - strand, within ABZR86_RS19265 at 311.530 kb on - strand, within ABZR86_RS19265 at 311.530 kb on - strand, within ABZR86_RS19265 at 311.644 kb on + strand at 311.644 kb on + strand at 311.644 kb on + strand at 311.645 kb on - strand at 311.645 kb on - strand at 311.645 kb on - strand at 311.764 kb on + strand at 311.764 kb on + strand at 311.764 kb on + strand at 311.765 kb on - strand at 311.765 kb on - strand at 311.765 kb on - strand at 311.890 kb on + strand, within ABZR86_RS19270 at 311.890 kb on + strand, within ABZR86_RS19270 at 311.890 kb on + strand, within ABZR86_RS19270 at 311.890 kb on + strand, within ABZR86_RS19270 at 311.890 kb on + strand, within ABZR86_RS19270 at 311.890 kb on + strand, within ABZR86_RS19270 at 311.891 kb on - strand, within ABZR86_RS19270 at 311.953 kb on + strand, within ABZR86_RS19270 at 312.050 kb on + strand, within ABZR86_RS19270 at 312.050 kb on + strand, within ABZR86_RS19270 at 312.050 kb on + strand, within ABZR86_RS19270 at 312.051 kb on - strand, within ABZR86_RS19270 at 312.051 kb on - strand, within ABZR86_RS19270 at 312.051 kb on - strand, within ABZR86_RS19270 at 312.051 kb on - strand, within ABZR86_RS19270 at 312.085 kb on + strand, within ABZR86_RS19270 at 312.086 kb on - strand, within ABZR86_RS19270 at 312.265 kb on + strand, within ABZR86_RS19270 at 312.265 kb on + strand, within ABZR86_RS19270 at 312.503 kb on - strand, within ABZR86_RS19270 at 312.829 kb on + strand, within ABZR86_RS19270 at 312.830 kb on - strand, within ABZR86_RS19270 at 313.035 kb on - strand, within ABZR86_RS19270 at 313.036 kb on + strand, within ABZR86_RS19270 at 313.036 kb on + strand, within ABZR86_RS19270 at 313.037 kb on - strand, within ABZR86_RS19270 at 313.045 kb on + strand, within ABZR86_RS19270 at 313.045 kb on + strand, within ABZR86_RS19270 at 313.046 kb on - strand, within ABZR86_RS19270 at 313.046 kb on - strand, within ABZR86_RS19270 at 313.088 kb on + strand, within ABZR86_RS19270 at 313.089 kb on - strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.090 kb on + strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.091 kb on - strand, within ABZR86_RS19270 at 313.333 kb on + strand, within ABZR86_RS19270 at 313.432 kb on + strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.433 kb on - strand, within ABZR86_RS19270 at 313.491 kb on + strand at 313.492 kb on - strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.495 kb on + strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.496 kb on - strand at 313.516 kb on + strand at 313.516 kb on + strand at 313.517 kb on - strand at 313.682 kb on + strand at 313.682 kb on + strand at 313.769 kb on + strand at 314.406 kb on + strand, within ABZR86_RS19275 at 314.406 kb on + strand, within ABZR86_RS19275 at 314.407 kb on - strand, within ABZR86_RS19275
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 310,624 + ABZR86_RS19260 0.70 -0.7 310,625 - ABZR86_RS19260 0.70 +0.3 310,625 - ABZR86_RS19260 0.70 -0.4 310,636 + ABZR86_RS19260 0.71 -0.3 310,637 - ABZR86_RS19260 0.71 +1.8 310,637 - ABZR86_RS19260 0.71 +0.9 310,648 + ABZR86_RS19260 0.72 -0.9 310,648 + ABZR86_RS19260 0.72 -0.4 310,648 + ABZR86_RS19260 0.72 +0.3 310,648 + ABZR86_RS19260 0.72 +0.2 310,648 + ABZR86_RS19260 0.72 -0.6 310,649 - ABZR86_RS19260 0.72 -0.8 310,649 - ABZR86_RS19260 0.72 -0.1 310,649 - ABZR86_RS19260 0.72 -0.4 310,649 - ABZR86_RS19260 0.72 +0.2 310,649 - ABZR86_RS19260 0.72 -0.0 310,649 - ABZR86_RS19260 0.72 -1.2 310,649 - ABZR86_RS19260 0.72 -0.4 310,649 - ABZR86_RS19260 0.72 -0.3 310,649 - ABZR86_RS19260 0.72 +0.0 310,735 + ABZR86_RS19260 0.75 +0.2 311,083 - +0.0 311,182 + +0.1 311,182 + +0.9 311,183 - +0.4 311,183 - +0.1 311,183 - -0.3 311,183 - -1.7 311,217 + +0.4 311,240 - +0.2 311,272 + +0.8 311,273 - +0.8 311,273 - -0.4 311,273 - -0.3 311,273 - +0.1 311,273 - -0.3 311,273 - +0.1 311,436 + ABZR86_RS19265 0.14 -0.5 311,436 + ABZR86_RS19265 0.14 +0.0 311,437 - ABZR86_RS19265 0.15 +0.3 311,437 - ABZR86_RS19265 0.15 -0.1 311,472 + ABZR86_RS19265 0.33 +0.6 311,472 + ABZR86_RS19265 0.33 -0.6 311,473 - ABZR86_RS19265 0.33 +0.4 311,520 + ABZR86_RS19265 0.57 +0.3 311,520 + ABZR86_RS19265 0.57 +0.6 311,520 + ABZR86_RS19265 0.57 +0.1 311,520 + ABZR86_RS19265 0.57 +0.1 311,520 + ABZR86_RS19265 0.57 -0.4 311,520 + ABZR86_RS19265 0.57 -0.0 311,530 - ABZR86_RS19265 0.63 +0.9 311,530 - ABZR86_RS19265 0.63 +0.3 311,530 - ABZR86_RS19265 0.63 +1.2 311,530 - ABZR86_RS19265 0.63 -0.1 311,644 + -0.1 311,644 + +0.1 311,644 + -0.0 311,645 - +0.2 311,645 - -0.0 311,645 - -0.0 311,764 + +0.2 311,764 + +0.3 311,764 + +0.0 311,765 - +0.1 311,765 - +0.5 311,765 - -0.2 311,890 + ABZR86_RS19270 0.13 -0.9 311,890 + ABZR86_RS19270 0.13 +0.3 311,890 + ABZR86_RS19270 0.13 -0.1 311,890 + ABZR86_RS19270 0.13 +0.1 311,890 + ABZR86_RS19270 0.13 +1.1 311,890 + ABZR86_RS19270 0.13 +0.5 311,891 - ABZR86_RS19270 0.13 +0.1 311,953 + ABZR86_RS19270 0.16 -0.8 312,050 + ABZR86_RS19270 0.21 -0.2 312,050 + ABZR86_RS19270 0.21 -0.1 312,050 + ABZR86_RS19270 0.21 -0.7 312,051 - ABZR86_RS19270 0.21 -0.6 312,051 - ABZR86_RS19270 0.21 +0.3 312,051 - ABZR86_RS19270 0.21 +0.1 312,051 - ABZR86_RS19270 0.21 +0.8 312,085 + ABZR86_RS19270 0.23 -0.2 312,086 - ABZR86_RS19270 0.23 +0.2 312,265 + ABZR86_RS19270 0.31 -0.5 312,265 + ABZR86_RS19270 0.31 -0.4 312,503 - ABZR86_RS19270 0.43 -0.2 312,829 + ABZR86_RS19270 0.59 +0.1 312,830 - ABZR86_RS19270 0.59 -0.7 313,035 - ABZR86_RS19270 0.68 -0.1 313,036 + ABZR86_RS19270 0.69 +0.0 313,036 + ABZR86_RS19270 0.69 +0.1 313,037 - ABZR86_RS19270 0.69 +0.3 313,045 + ABZR86_RS19270 0.69 -0.7 313,045 + ABZR86_RS19270 0.69 +0.1 313,046 - ABZR86_RS19270 0.69 -0.1 313,046 - ABZR86_RS19270 0.69 +1.2 313,088 + ABZR86_RS19270 0.71 -0.2 313,089 - ABZR86_RS19270 0.71 -0.5 313,090 + ABZR86_RS19270 0.71 +0.3 313,090 + ABZR86_RS19270 0.71 +0.0 313,090 + ABZR86_RS19270 0.71 -0.7 313,090 + ABZR86_RS19270 0.71 -1.8 313,091 - ABZR86_RS19270 0.71 -0.3 313,091 - ABZR86_RS19270 0.71 +0.3 313,091 - ABZR86_RS19270 0.71 -0.0 313,091 - ABZR86_RS19270 0.71 +0.2 313,333 + ABZR86_RS19270 0.83 +0.7 313,432 + ABZR86_RS19270 0.88 +0.1 313,433 - ABZR86_RS19270 0.88 +0.0 313,433 - ABZR86_RS19270 0.88 +0.1 313,433 - ABZR86_RS19270 0.88 -0.3 313,433 - ABZR86_RS19270 0.88 -1.0 313,491 + -0.1 313,492 - -0.5 313,495 + -0.4 313,495 + +0.0 313,495 + -0.9 313,495 + -0.2 313,495 + +1.2 313,495 + +0.1 313,495 + -0.1 313,496 - -0.5 313,496 - -0.4 313,496 - +0.4 313,496 - -0.2 313,496 - +0.7 313,496 - -0.2 313,496 - +0.3 313,496 - +0.8 313,516 + +0.0 313,516 + +0.5 313,517 - +0.7 313,682 + +0.4 313,682 + -0.5 313,769 + +0.2 314,406 + ABZR86_RS19275 0.17 +0.2 314,406 + ABZR86_RS19275 0.17 +0.2 314,407 - ABZR86_RS19275 0.17 -0.2
Or see this region's nucleotide sequence