Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS18010 and ABZR86_RS18015 are separated by 129 nucleotides ABZR86_RS18015 and ABZR86_RS18020 are separated by 104 nucleotides ABZR86_RS18020 and ABZR86_RS18025 are separated by 3 nucleotides ABZR86_RS18025 and ABZR86_RS18030 overlap by 4 nucleotides
ABZR86_RS18010: ABZR86_RS18010 - aldo/keto reductase, at 16,447 to 17,259
_RS18010
ABZR86_RS18015: ABZR86_RS18015 - TetR/AcrR family transcriptional regulator, at 17,389 to 18,003
_RS18015
ABZR86_RS18020: ABZR86_RS18020 - MBL fold metallo-hydrolase, at 18,108 to 19,235
_RS18020
ABZR86_RS18025: ABZR86_RS18025 - poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD, at 19,239 to 19,709
_RS18025
ABZR86_RS18030: ABZR86_RS18030 - poly-beta-1,6-N-acetyl-D-glucosamine synthase, at 19,706 to 20,953
_RS18030
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1 at 17.322 kb on - strand at 17.330 kb on + strand at 17.330 kb on + strand at 17.330 kb on + strand at 17.330 kb on + strand at 17.330 kb on + strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.331 kb on - strand at 17.336 kb on + strand at 17.336 kb on + strand at 17.337 kb on - strand at 17.337 kb on - strand at 17.337 kb on - strand at 17.337 kb on - strand at 17.396 kb on + strand at 17.413 kb on - strand at 17.765 kb on + strand, within ABZR86_RS18015 at 17.766 kb on - strand, within ABZR86_RS18015 at 17.852 kb on + strand, within ABZR86_RS18015 at 17.853 kb on - strand, within ABZR86_RS18015 at 18.107 kb on + strand at 18.568 kb on - strand, within ABZR86_RS18020 at 18.597 kb on + strand, within ABZR86_RS18020 at 18.598 kb on - strand, within ABZR86_RS18020 at 18.924 kb on + strand, within ABZR86_RS18020 at 18.924 kb on + strand, within ABZR86_RS18020 at 18.942 kb on + strand, within ABZR86_RS18020 at 19.445 kb on - strand, within ABZR86_RS18025 at 19.445 kb on - strand, within ABZR86_RS18025 at 19.445 kb on - strand, within ABZR86_RS18025 at 19.549 kb on + strand, within ABZR86_RS18025 at 19.842 kb on + strand, within ABZR86_RS18030 at 19.842 kb on + strand, within ABZR86_RS18030 at 19.842 kb on + strand, within ABZR86_RS18030 at 19.843 kb on - strand, within ABZR86_RS18030 at 20.000 kb on + strand, within ABZR86_RS18030 at 20.050 kb on - strand, within ABZR86_RS18030 at 20.050 kb on - strand, within ABZR86_RS18030 at 20.107 kb on - strand, within ABZR86_RS18030 at 20.107 kb on - strand, within ABZR86_RS18030
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 17,322 - +0.3 17,330 + -0.1 17,330 + +0.2 17,330 + -0.4 17,330 + -1.8 17,330 + +0.0 17,331 - -0.6 17,331 - +0.6 17,331 - -0.5 17,331 - -0.2 17,331 - -0.2 17,331 - -0.1 17,331 - +1.2 17,331 - -0.1 17,331 - +0.1 17,336 + +0.4 17,336 + +0.4 17,337 - +1.2 17,337 - +1.0 17,337 - +0.2 17,337 - -0.3 17,396 + -1.3 17,413 - -0.6 17,765 + ABZR86_RS18015 0.61 -1.3 17,766 - ABZR86_RS18015 0.61 +0.4 17,852 + ABZR86_RS18015 0.75 +0.4 17,853 - ABZR86_RS18015 0.75 +0.0 18,107 + +0.2 18,568 - ABZR86_RS18020 0.41 -0.2 18,597 + ABZR86_RS18020 0.43 -0.1 18,598 - ABZR86_RS18020 0.43 +0.6 18,924 + ABZR86_RS18020 0.72 +0.4 18,924 + ABZR86_RS18020 0.72 -0.1 18,942 + ABZR86_RS18020 0.74 -0.4 19,445 - ABZR86_RS18025 0.44 -0.0 19,445 - ABZR86_RS18025 0.44 +0.2 19,445 - ABZR86_RS18025 0.44 -2.4 19,549 + ABZR86_RS18025 0.66 -1.0 19,842 + ABZR86_RS18030 0.11 -0.3 19,842 + ABZR86_RS18030 0.11 +0.3 19,842 + ABZR86_RS18030 0.11 +0.0 19,843 - ABZR86_RS18030 0.11 -0.2 20,000 + ABZR86_RS18030 0.24 +0.1 20,050 - ABZR86_RS18030 0.28 -0.5 20,050 - ABZR86_RS18030 0.28 -0.2 20,107 - ABZR86_RS18030 0.32 +1.0 20,107 - ABZR86_RS18030 0.32 -0.5
Or see this region's nucleotide sequence