Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS17690 and ABZR86_RS17695 are separated by 300 nucleotides ABZR86_RS17695 and ABZR86_RS17700 are separated by 71 nucleotides ABZR86_RS17700 and ABZR86_RS17705 are separated by 23 nucleotides
ABZR86_RS17690: ABZR86_RS17690 - protease pro-enzyme activation domain-containing protein, at 3,990,691 to 3,992,493
_RS17690
ABZR86_RS17695: ABZR86_RS17695 - MerR family DNA-binding protein, at 3,992,794 to 3,993,222
_RS17695
ABZR86_RS17700: ABZR86_RS17700 - oxidoreductase, at 3,993,294 to 3,994,127
_RS17700
ABZR86_RS17705: ABZR86_RS17705 - ATP-binding protein, at 3,994,151 to 3,995,203
_RS17705
Position (kb)
3993
3994
3995 Strain fitness (log2 ratio)
-1
0
1 at 3992.349 kb on - strand at 3992.349 kb on - strand at 3992.512 kb on + strand at 3992.645 kb on - strand at 3992.645 kb on - strand at 3992.711 kb on + strand at 3993.042 kb on + strand, within ABZR86_RS17695 at 3993.165 kb on - strand, within ABZR86_RS17695 at 3993.308 kb on - strand at 3993.372 kb on + strand at 3993.372 kb on + strand at 3993.372 kb on + strand at 3993.373 kb on - strand at 3993.373 kb on - strand at 3993.373 kb on - strand at 3993.381 kb on + strand, within ABZR86_RS17700 at 3993.540 kb on + strand, within ABZR86_RS17700 at 3993.540 kb on + strand, within ABZR86_RS17700 at 3993.550 kb on - strand, within ABZR86_RS17700 at 3993.550 kb on - strand, within ABZR86_RS17700 at 3993.627 kb on - strand, within ABZR86_RS17700 at 3993.727 kb on - strand, within ABZR86_RS17700 at 3994.153 kb on - strand at 3994.153 kb on - strand at 3994.808 kb on + strand, within ABZR86_RS17705 at 3994.808 kb on + strand, within ABZR86_RS17705 at 3994.986 kb on + strand, within ABZR86_RS17705 at 3994.987 kb on - strand, within ABZR86_RS17705 at 3995.099 kb on - strand at 3995.099 kb on - strand at 3995.113 kb on - strand at 3995.113 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,992,349 - -0.4 3,992,349 - +0.3 3,992,512 + +0.5 3,992,645 - -0.2 3,992,645 - +0.1 3,992,711 + +0.0 3,993,042 + ABZR86_RS17695 0.58 -0.2 3,993,165 - ABZR86_RS17695 0.86 +0.2 3,993,308 - -0.2 3,993,372 + -0.1 3,993,372 + -0.6 3,993,372 + -0.1 3,993,373 - -0.7 3,993,373 - -0.5 3,993,373 - -1.0 3,993,381 + ABZR86_RS17700 0.10 -0.6 3,993,540 + ABZR86_RS17700 0.29 +0.2 3,993,540 + ABZR86_RS17700 0.29 +0.6 3,993,550 - ABZR86_RS17700 0.31 +0.2 3,993,550 - ABZR86_RS17700 0.31 +0.5 3,993,627 - ABZR86_RS17700 0.40 +0.3 3,993,727 - ABZR86_RS17700 0.52 +1.3 3,994,153 - +0.0 3,994,153 - +0.6 3,994,808 + ABZR86_RS17705 0.62 +0.0 3,994,808 + ABZR86_RS17705 0.62 -0.1 3,994,986 + ABZR86_RS17705 0.79 +0.4 3,994,987 - ABZR86_RS17705 0.79 +0.5 3,995,099 - +0.6 3,995,099 - -0.1 3,995,113 - +0.1 3,995,113 - -0.2
Or see this region's nucleotide sequence