Experiment: Cisplatin 0.0032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14280 and ABZR86_RS14285 are separated by 205 nucleotides ABZR86_RS14285 and ABZR86_RS14290 are separated by 94 nucleotides ABZR86_RS14290 and ABZR86_RS14295 are separated by 56 nucleotides
ABZR86_RS14280: ABZR86_RS14280 - methyltransferase, at 3,178,011 to 3,179,057
_RS14280
ABZR86_RS14285: ABZR86_RS14285 - antibiotic biosynthesis monooxygenase, at 3,179,263 to 3,179,592
_RS14285
ABZR86_RS14290: ABZR86_RS14290 - FAD-dependent monooxygenase, at 3,179,687 to 3,180,913
_RS14290
ABZR86_RS14295: ABZR86_RS14295 - NAD(P)/FAD-dependent oxidoreductase, at 3,180,970 to 3,182,637
_RS14295
Position (kb)
3179
3180
3181 Strain fitness (log2 ratio)
-2
-1
0
1 at 3179.152 kb on - strand at 3179.456 kb on - strand, within ABZR86_RS14285 at 3179.458 kb on - strand, within ABZR86_RS14285 at 3180.038 kb on + strand, within ABZR86_RS14290 at 3180.039 kb on - strand, within ABZR86_RS14290 at 3180.353 kb on + strand, within ABZR86_RS14290 at 3180.641 kb on + strand, within ABZR86_RS14290 at 3180.642 kb on - strand, within ABZR86_RS14290 at 3180.642 kb on - strand, within ABZR86_RS14290 at 3180.912 kb on - strand at 3180.963 kb on + strand at 3180.963 kb on + strand at 3180.964 kb on - strand at 3181.033 kb on + strand at 3181.034 kb on - strand at 3181.156 kb on + strand, within ABZR86_RS14295 at 3181.156 kb on + strand, within ABZR86_RS14295 at 3181.157 kb on - strand, within ABZR86_RS14295 at 3181.157 kb on - strand, within ABZR86_RS14295 at 3181.168 kb on + strand, within ABZR86_RS14295 at 3181.216 kb on + strand, within ABZR86_RS14295 at 3181.216 kb on + strand, within ABZR86_RS14295 at 3181.216 kb on + strand, within ABZR86_RS14295 at 3181.216 kb on + strand, within ABZR86_RS14295 at 3181.217 kb on - strand, within ABZR86_RS14295 at 3181.243 kb on + strand, within ABZR86_RS14295 at 3181.606 kb on + strand, within ABZR86_RS14295 at 3181.606 kb on + strand, within ABZR86_RS14295
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0032 mg/ml remove 3,179,152 - +0.5 3,179,456 - ABZR86_RS14285 0.58 +0.8 3,179,458 - ABZR86_RS14285 0.59 -0.0 3,180,038 + ABZR86_RS14290 0.29 -0.5 3,180,039 - ABZR86_RS14290 0.29 +0.4 3,180,353 + ABZR86_RS14290 0.54 +0.7 3,180,641 + ABZR86_RS14290 0.78 -2.3 3,180,642 - ABZR86_RS14290 0.78 -0.1 3,180,642 - ABZR86_RS14290 0.78 -0.2 3,180,912 - -1.8 3,180,963 + +0.0 3,180,963 + -0.6 3,180,964 - -0.6 3,181,033 + -0.3 3,181,034 - +1.1 3,181,156 + ABZR86_RS14295 0.11 -0.1 3,181,156 + ABZR86_RS14295 0.11 +0.2 3,181,157 - ABZR86_RS14295 0.11 +0.2 3,181,157 - ABZR86_RS14295 0.11 +0.4 3,181,168 + ABZR86_RS14295 0.12 -0.1 3,181,216 + ABZR86_RS14295 0.15 +0.3 3,181,216 + ABZR86_RS14295 0.15 +0.3 3,181,216 + ABZR86_RS14295 0.15 +0.1 3,181,216 + ABZR86_RS14295 0.15 +0.5 3,181,217 - ABZR86_RS14295 0.15 +0.4 3,181,243 + ABZR86_RS14295 0.16 -0.4 3,181,606 + ABZR86_RS14295 0.38 +0.8 3,181,606 + ABZR86_RS14295 0.38 +1.5
Or see this region's nucleotide sequence