Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3181 and DvMF_3182 are separated by 407 nucleotides DvMF_3182 and DvMF_3183 are separated by 277 nucleotides DvMF_3183 and DvMF_3184 are separated by 302 nucleotides
DvMF_3181: DvMF_3181 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 4,012,023 to 4,014,119
_3181
DvMF_3182: DvMF_3182 - hypothetical protein (RefSeq), at 4,014,527 to 4,015,042
_3182
DvMF_3183: DvMF_3183 - transcriptional regulator, TraR/DksA family (RefSeq), at 4,015,320 to 4,015,544
_3183
DvMF_3184: DvMF_3184 - Cupin 2 conserved barrel domain protein (RefSeq), at 4,015,847 to 4,016,251
_3184
Position (kb)
4014
4015
4016 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4013.561 kb on - strand, within DvMF_3181 at 4013.802 kb on - strand, within DvMF_3181 at 4014.478 kb on - strand at 4014.587 kb on + strand, within DvMF_3182 at 4014.636 kb on + strand, within DvMF_3182 at 4014.688 kb on - strand, within DvMF_3182 at 4014.865 kb on + strand, within DvMF_3182 at 4014.865 kb on + strand, within DvMF_3182 at 4014.905 kb on - strand, within DvMF_3182 at 4014.975 kb on - strand, within DvMF_3182 at 4015.243 kb on - strand at 4015.379 kb on - strand, within DvMF_3183 at 4015.421 kb on - strand, within DvMF_3183 at 4015.505 kb on + strand, within DvMF_3183 at 4015.561 kb on + strand at 4015.977 kb on + strand, within DvMF_3184
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 4,013,561 - DvMF_3181 0.73 +0.8 4,013,802 - DvMF_3181 0.85 -0.8 4,014,478 - -3.2 4,014,587 + DvMF_3182 0.12 -1.1 4,014,636 + DvMF_3182 0.21 -1.7 4,014,688 - DvMF_3182 0.31 -0.4 4,014,865 + DvMF_3182 0.66 -0.3 4,014,865 + DvMF_3182 0.66 -0.6 4,014,905 - DvMF_3182 0.73 -0.1 4,014,975 - DvMF_3182 0.87 -0.7 4,015,243 - -1.2 4,015,379 - DvMF_3183 0.26 -0.8 4,015,421 - DvMF_3183 0.45 +0.4 4,015,505 + DvMF_3183 0.82 -0.1 4,015,561 + -4.1 4,015,977 + DvMF_3184 0.32 +0.1
Or see this region's nucleotide sequence