Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3143 and DvMF_3144 are separated by 131 nucleotides DvMF_3144 and DvMF_3145 are separated by 323 nucleotides
DvMF_3143: DvMF_3143 - glycosyl transferase family 2 (RefSeq), at 3,963,731 to 3,965,530
_3143
DvMF_3144: DvMF_3144 - glycosyl transferase family 2 (RefSeq), at 3,965,662 to 3,967,359
_3144
DvMF_3145: DvMF_3145 - tRNA (uracil-5-)-methyltransferase Gid (RefSeq), at 3,967,683 to 3,969,020
_3145
Position (kb)
3965
3966
3967
3968 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3964.680 kb on - strand, within DvMF_3143 at 3964.694 kb on + strand, within DvMF_3143 at 3964.752 kb on + strand, within DvMF_3143 at 3964.792 kb on - strand, within DvMF_3143 at 3964.877 kb on + strand, within DvMF_3143 at 3964.941 kb on + strand, within DvMF_3143 at 3964.942 kb on - strand, within DvMF_3143 at 3965.076 kb on + strand, within DvMF_3143 at 3965.084 kb on - strand, within DvMF_3143 at 3965.236 kb on - strand, within DvMF_3143 at 3965.283 kb on + strand, within DvMF_3143 at 3965.735 kb on - strand at 3965.735 kb on - strand at 3965.972 kb on + strand, within DvMF_3144 at 3965.980 kb on - strand, within DvMF_3144 at 3966.276 kb on + strand, within DvMF_3144 at 3966.334 kb on + strand, within DvMF_3144 at 3966.548 kb on + strand, within DvMF_3144 at 3966.773 kb on + strand, within DvMF_3144 at 3966.871 kb on - strand, within DvMF_3144 at 3966.887 kb on - strand, within DvMF_3144 at 3967.074 kb on - strand, within DvMF_3144 at 3967.076 kb on - strand, within DvMF_3144 at 3967.093 kb on - strand, within DvMF_3144 at 3967.137 kb on + strand, within DvMF_3144 at 3967.268 kb on - strand at 3968.018 kb on + strand, within DvMF_3145 at 3968.172 kb on + strand, within DvMF_3145 at 3968.172 kb on + strand, within DvMF_3145 at 3968.218 kb on + strand, within DvMF_3145 at 3968.248 kb on + strand, within DvMF_3145 at 3968.268 kb on - strand, within DvMF_3145
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 3,964,680 - DvMF_3143 0.53 +0.1 3,964,694 + DvMF_3143 0.54 +0.1 3,964,752 + DvMF_3143 0.57 +0.1 3,964,792 - DvMF_3143 0.59 -1.5 3,964,877 + DvMF_3143 0.64 -1.1 3,964,941 + DvMF_3143 0.67 -0.0 3,964,942 - DvMF_3143 0.67 -1.0 3,965,076 + DvMF_3143 0.75 +0.1 3,965,084 - DvMF_3143 0.75 -0.4 3,965,236 - DvMF_3143 0.84 -0.0 3,965,283 + DvMF_3143 0.86 -0.6 3,965,735 - -0.7 3,965,735 - -0.7 3,965,972 + DvMF_3144 0.18 -0.4 3,965,980 - DvMF_3144 0.19 +1.4 3,966,276 + DvMF_3144 0.36 -2.8 3,966,334 + DvMF_3144 0.40 -0.4 3,966,548 + DvMF_3144 0.52 +0.0 3,966,773 + DvMF_3144 0.65 -0.0 3,966,871 - DvMF_3144 0.71 -0.8 3,966,887 - DvMF_3144 0.72 -0.4 3,967,074 - DvMF_3144 0.83 -0.1 3,967,076 - DvMF_3144 0.83 -0.5 3,967,093 - DvMF_3144 0.84 -1.2 3,967,137 + DvMF_3144 0.87 +0.2 3,967,268 - -1.7 3,968,018 + DvMF_3145 0.25 -0.4 3,968,172 + DvMF_3145 0.37 -3.3 3,968,172 + DvMF_3145 0.37 -0.2 3,968,218 + DvMF_3145 0.40 +0.4 3,968,248 + DvMF_3145 0.42 -0.6 3,968,268 - DvMF_3145 0.44 -0.7
Or see this region's nucleotide sequence