Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2563 and DvMF_2564 are separated by 600 nucleotides DvMF_2564 and DvMF_2565 are separated by 159 nucleotides
DvMF_2563: DvMF_2563 - protein of unknown function DUF721 (RefSeq), at 3,238,334 to 3,238,870
_2563
DvMF_2564: DvMF_2564 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,239,471 to 3,241,990
_2564
DvMF_2565: DvMF_2565 - periplasmic phosphate binding protein (RefSeq), at 3,242,150 to 3,243,184
_2565
Position (kb)
3239
3240
3241
3242 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3238.876 kb on + strand at 3239.023 kb on - strand at 3239.174 kb on - strand at 3239.236 kb on + strand at 3239.319 kb on - strand at 3239.392 kb on + strand at 3239.400 kb on - strand at 3239.407 kb on + strand at 3239.455 kb on + strand at 3239.457 kb on - strand at 3239.595 kb on + strand at 3239.662 kb on - strand at 3239.683 kb on + strand at 3239.813 kb on - strand, within DvMF_2564 at 3239.820 kb on - strand, within DvMF_2564 at 3239.852 kb on - strand, within DvMF_2564 at 3240.076 kb on + strand, within DvMF_2564 at 3240.215 kb on - strand, within DvMF_2564 at 3240.262 kb on + strand, within DvMF_2564 at 3240.262 kb on + strand, within DvMF_2564 at 3240.286 kb on + strand, within DvMF_2564 at 3240.304 kb on - strand, within DvMF_2564 at 3240.446 kb on + strand, within DvMF_2564 at 3240.539 kb on - strand, within DvMF_2564 at 3240.743 kb on + strand, within DvMF_2564 at 3240.743 kb on + strand, within DvMF_2564 at 3240.780 kb on - strand, within DvMF_2564 at 3240.839 kb on - strand, within DvMF_2564 at 3240.908 kb on - strand, within DvMF_2564 at 3240.993 kb on + strand, within DvMF_2564 at 3241.214 kb on + strand, within DvMF_2564 at 3241.229 kb on + strand, within DvMF_2564 at 3241.263 kb on - strand, within DvMF_2564 at 3241.347 kb on + strand, within DvMF_2564 at 3241.469 kb on - strand, within DvMF_2564 at 3241.609 kb on + strand, within DvMF_2564 at 3242.059 kb on + strand at 3242.060 kb on + strand at 3242.242 kb on + strand at 3242.390 kb on - strand, within DvMF_2565 at 3242.622 kb on + strand, within DvMF_2565
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 3,238,876 + -0.6 3,239,023 - -0.5 3,239,174 - +0.2 3,239,236 + -0.3 3,239,319 - -0.6 3,239,392 + -1.0 3,239,400 - -0.3 3,239,407 + -0.7 3,239,455 + -0.4 3,239,457 - -0.6 3,239,595 + -0.3 3,239,662 - -1.4 3,239,683 + +1.3 3,239,813 - DvMF_2564 0.14 -0.5 3,239,820 - DvMF_2564 0.14 +0.1 3,239,852 - DvMF_2564 0.15 -0.3 3,240,076 + DvMF_2564 0.24 -2.0 3,240,215 - DvMF_2564 0.30 -1.0 3,240,262 + DvMF_2564 0.31 -0.4 3,240,262 + DvMF_2564 0.31 -0.8 3,240,286 + DvMF_2564 0.32 -0.1 3,240,304 - DvMF_2564 0.33 -1.0 3,240,446 + DvMF_2564 0.39 -0.6 3,240,539 - DvMF_2564 0.42 -0.1 3,240,743 + DvMF_2564 0.50 -0.6 3,240,743 + DvMF_2564 0.50 -0.4 3,240,780 - DvMF_2564 0.52 -0.6 3,240,839 - DvMF_2564 0.54 -2.4 3,240,908 - DvMF_2564 0.57 -0.9 3,240,993 + DvMF_2564 0.60 +0.2 3,241,214 + DvMF_2564 0.69 -1.9 3,241,229 + DvMF_2564 0.70 -0.5 3,241,263 - DvMF_2564 0.71 -0.5 3,241,347 + DvMF_2564 0.74 -4.7 3,241,469 - DvMF_2564 0.79 -0.2 3,241,609 + DvMF_2564 0.85 -0.9 3,242,059 + -0.9 3,242,060 + -0.4 3,242,242 + -1.6 3,242,390 - DvMF_2565 0.23 +0.1 3,242,622 + DvMF_2565 0.46 -0.8
Or see this region's nucleotide sequence