Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1935 and DvMF_1936 are separated by 180 nucleotides DvMF_1936 and DvMF_1937 are separated by 136 nucleotides
DvMF_1935: DvMF_1935 - hypothetical protein (RefSeq), at 2,388,346 to 2,388,756
_1935
DvMF_1936: DvMF_1936 - Deoxyribodipyrimidine photo-lyase (RefSeq), at 2,388,937 to 2,390,421
_1936
DvMF_1937: DvMF_1937 - response regulator receiver protein (RefSeq), at 2,390,558 to 2,391,367
_1937
Position (kb)
2388
2389
2390
2391 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2388.140 kb on + strand at 2388.318 kb on + strand at 2388.505 kb on + strand, within DvMF_1935 at 2388.550 kb on + strand, within DvMF_1935 at 2388.628 kb on + strand, within DvMF_1935 at 2388.714 kb on + strand, within DvMF_1935 at 2388.746 kb on - strand at 2388.759 kb on - strand at 2388.759 kb on - strand at 2388.935 kb on + strand at 2388.938 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2388.943 kb on - strand at 2389.164 kb on - strand, within DvMF_1936 at 2389.183 kb on + strand, within DvMF_1936 at 2389.362 kb on + strand, within DvMF_1936 at 2389.380 kb on - strand, within DvMF_1936 at 2389.652 kb on - strand, within DvMF_1936 at 2389.903 kb on + strand, within DvMF_1936 at 2389.908 kb on + strand, within DvMF_1936 at 2390.119 kb on + strand, within DvMF_1936 at 2390.147 kb on - strand, within DvMF_1936 at 2390.295 kb on - strand at 2390.521 kb on + strand at 2390.622 kb on - strand at 2391.126 kb on + strand, within DvMF_1937 at 2391.216 kb on - strand, within DvMF_1937 at 2391.391 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 2,388,140 + -0.2 2,388,318 + -0.3 2,388,505 + DvMF_1935 0.39 -0.2 2,388,550 + DvMF_1935 0.50 -0.9 2,388,628 + DvMF_1935 0.69 +0.4 2,388,714 + DvMF_1935 0.90 +0.5 2,388,746 - -0.5 2,388,759 - -2.1 2,388,759 - -0.4 2,388,935 + -0.4 2,388,938 - +0.4 2,388,943 - -0.6 2,388,943 - -4.0 2,388,943 - -1.0 2,388,943 - +0.4 2,388,943 - -0.5 2,389,164 - DvMF_1936 0.15 -0.7 2,389,183 + DvMF_1936 0.17 -0.3 2,389,362 + DvMF_1936 0.29 -1.6 2,389,380 - DvMF_1936 0.30 -1.0 2,389,652 - DvMF_1936 0.48 -1.4 2,389,903 + DvMF_1936 0.65 -0.5 2,389,908 + DvMF_1936 0.65 -0.4 2,390,119 + DvMF_1936 0.80 -0.5 2,390,147 - DvMF_1936 0.81 -1.1 2,390,295 - -2.0 2,390,521 + -1.1 2,390,622 - -0.4 2,391,126 + DvMF_1937 0.70 -0.7 2,391,216 - DvMF_1937 0.81 -0.5 2,391,391 + +0.7
Or see this region's nucleotide sequence