Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1921 and DvMF_1922 are separated by 134 nucleotides DvMF_1922 and DvMF_1923 overlap by 1 nucleotides
DvMF_1921: DvMF_1921 - A/G-specific adenine glycosylase (RefSeq), at 2,367,110 to 2,368,414
_1921
DvMF_1922: DvMF_1922 - hypothetical protein (RefSeq), at 2,368,549 to 2,371,248
_1922
DvMF_1923: DvMF_1923 - glycosyl transferase family 2 (RefSeq), at 2,371,248 to 2,372,399
_1923
Position (kb)
2368
2369
2370
2371
2372 Strain fitness (log2 ratio)
-2
-1
0
1 at 2367.572 kb on - strand, within DvMF_1921 at 2367.956 kb on - strand, within DvMF_1921 at 2368.722 kb on - strand at 2368.843 kb on - strand, within DvMF_1922 at 2368.891 kb on + strand, within DvMF_1922 at 2369.275 kb on + strand, within DvMF_1922 at 2369.500 kb on - strand, within DvMF_1922 at 2369.603 kb on - strand, within DvMF_1922 at 2369.797 kb on - strand, within DvMF_1922 at 2369.864 kb on - strand, within DvMF_1922 at 2369.969 kb on + strand, within DvMF_1922 at 2369.990 kb on - strand, within DvMF_1922 at 2370.033 kb on + strand, within DvMF_1922 at 2370.072 kb on - strand, within DvMF_1922 at 2370.240 kb on + strand, within DvMF_1922 at 2370.325 kb on + strand, within DvMF_1922 at 2370.398 kb on + strand, within DvMF_1922 at 2370.476 kb on + strand, within DvMF_1922 at 2370.730 kb on + strand, within DvMF_1922 at 2370.730 kb on + strand, within DvMF_1922 at 2370.771 kb on - strand, within DvMF_1922 at 2370.855 kb on - strand, within DvMF_1922 at 2370.954 kb on - strand, within DvMF_1922 at 2371.108 kb on - strand at 2371.108 kb on - strand at 2371.141 kb on - strand at 2371.212 kb on + strand at 2371.393 kb on + strand, within DvMF_1923 at 2372.116 kb on - strand, within DvMF_1923
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 2,367,572 - DvMF_1921 0.35 -1.0 2,367,956 - DvMF_1921 0.65 -0.4 2,368,722 - +1.1 2,368,843 - DvMF_1922 0.11 -1.6 2,368,891 + DvMF_1922 0.13 -0.7 2,369,275 + DvMF_1922 0.27 -1.8 2,369,500 - DvMF_1922 0.35 -0.1 2,369,603 - DvMF_1922 0.39 -2.6 2,369,797 - DvMF_1922 0.46 -0.5 2,369,864 - DvMF_1922 0.49 -2.4 2,369,969 + DvMF_1922 0.53 -1.5 2,369,990 - DvMF_1922 0.53 -2.2 2,370,033 + DvMF_1922 0.55 -0.9 2,370,072 - DvMF_1922 0.56 -0.8 2,370,240 + DvMF_1922 0.63 -0.6 2,370,325 + DvMF_1922 0.66 -0.9 2,370,398 + DvMF_1922 0.68 -2.0 2,370,476 + DvMF_1922 0.71 -0.4 2,370,730 + DvMF_1922 0.81 -1.0 2,370,730 + DvMF_1922 0.81 -2.0 2,370,771 - DvMF_1922 0.82 -0.3 2,370,855 - DvMF_1922 0.85 -0.9 2,370,954 - DvMF_1922 0.89 -0.7 2,371,108 - -1.4 2,371,108 - -0.1 2,371,141 - +0.1 2,371,212 + +0.1 2,371,393 + DvMF_1923 0.13 +0.3 2,372,116 - DvMF_1923 0.75 -0.1
Or see this region's nucleotide sequence