Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1728 and DvMF_1729 are separated by 329 nucleotides DvMF_1729 and DvMF_1730 are separated by 242 nucleotides
DvMF_1728: DvMF_1728 - ABC transporter related (RefSeq), at 2,110,944 to 2,111,777
_1728
DvMF_1729: DvMF_1729 - DNA mismatch repair protein MutL (RefSeq), at 2,112,107 to 2,114,398
_1729
DvMF_1730: DvMF_1730 - multi-sensor signal transduction histidine kinase (RefSeq), at 2,114,641 to 2,116,164
_1730
Position (kb)
2112
2113
2114
2115 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2111.122 kb on + strand, within DvMF_1728 at 2111.175 kb on + strand, within DvMF_1728 at 2111.272 kb on - strand, within DvMF_1728 at 2111.539 kb on + strand, within DvMF_1728 at 2111.681 kb on + strand, within DvMF_1728 at 2111.865 kb on + strand at 2111.905 kb on - strand at 2111.920 kb on + strand at 2112.001 kb on - strand at 2112.192 kb on - strand at 2112.752 kb on + strand, within DvMF_1729 at 2112.760 kb on - strand, within DvMF_1729 at 2112.811 kb on - strand, within DvMF_1729 at 2112.935 kb on - strand, within DvMF_1729 at 2112.949 kb on + strand, within DvMF_1729 at 2112.957 kb on - strand, within DvMF_1729 at 2113.009 kb on + strand, within DvMF_1729 at 2113.541 kb on - strand, within DvMF_1729 at 2113.578 kb on - strand, within DvMF_1729 at 2113.740 kb on - strand, within DvMF_1729 at 2113.864 kb on - strand, within DvMF_1729 at 2113.885 kb on + strand, within DvMF_1729 at 2113.898 kb on - strand, within DvMF_1729 at 2114.010 kb on - strand, within DvMF_1729 at 2114.130 kb on - strand, within DvMF_1729 at 2114.149 kb on - strand, within DvMF_1729 at 2114.352 kb on + strand at 2115.126 kb on + strand, within DvMF_1730 at 2115.205 kb on + strand, within DvMF_1730 at 2115.205 kb on + strand, within DvMF_1730 at 2115.205 kb on + strand, within DvMF_1730 at 2115.205 kb on + strand, within DvMF_1730 at 2115.213 kb on - strand, within DvMF_1730 at 2115.213 kb on - strand, within DvMF_1730 at 2115.223 kb on + strand, within DvMF_1730
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 2,111,122 + DvMF_1728 0.21 -0.8 2,111,175 + DvMF_1728 0.28 -4.4 2,111,272 - DvMF_1728 0.39 -1.1 2,111,539 + DvMF_1728 0.71 -0.7 2,111,681 + DvMF_1728 0.88 -0.8 2,111,865 + +1.4 2,111,905 - -3.2 2,111,920 + -1.2 2,112,001 - +0.1 2,112,192 - -0.3 2,112,752 + DvMF_1729 0.28 +0.3 2,112,760 - DvMF_1729 0.28 -0.4 2,112,811 - DvMF_1729 0.31 -0.3 2,112,935 - DvMF_1729 0.36 +0.1 2,112,949 + DvMF_1729 0.37 +0.4 2,112,957 - DvMF_1729 0.37 +0.0 2,113,009 + DvMF_1729 0.39 +0.2 2,113,541 - DvMF_1729 0.63 -4.2 2,113,578 - DvMF_1729 0.64 -0.7 2,113,740 - DvMF_1729 0.71 -0.3 2,113,864 - DvMF_1729 0.77 -0.4 2,113,885 + DvMF_1729 0.78 -0.1 2,113,898 - DvMF_1729 0.78 -0.6 2,114,010 - DvMF_1729 0.83 -0.4 2,114,130 - DvMF_1729 0.88 -1.5 2,114,149 - DvMF_1729 0.89 -1.1 2,114,352 + -0.0 2,115,126 + DvMF_1730 0.32 +0.2 2,115,205 + DvMF_1730 0.37 -0.9 2,115,205 + DvMF_1730 0.37 -0.5 2,115,205 + DvMF_1730 0.37 -0.5 2,115,205 + DvMF_1730 0.37 -1.0 2,115,213 - DvMF_1730 0.38 -1.1 2,115,213 - DvMF_1730 0.38 -0.8 2,115,223 + DvMF_1730 0.38 -1.0
Or see this region's nucleotide sequence