Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1690 and DvMF_1691 are separated by 227 nucleotides DvMF_1691 and DvMF_1692 are separated by 296 nucleotides DvMF_1692 and DvMF_1693 are separated by 454 nucleotides
DvMF_1690: DvMF_1690 - polysaccharide export protein (RefSeq), at 2,057,686 to 2,059,362
_1690
DvMF_1691: DvMF_1691 - hypothetical protein (RefSeq), at 2,059,590 to 2,059,991
_1691
DvMF_1692: DvMF_1692 - PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq), at 2,060,288 to 2,061,853
_1692
DvMF_1693: DvMF_1693 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 2,062,308 to 2,064,083
_1693
Position (kb)
2060
2061
2062 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2059.395 kb on + strand at 2059.547 kb on - strand at 2059.917 kb on + strand, within DvMF_1691 at 2060.222 kb on + strand at 2060.376 kb on + strand at 2060.531 kb on - strand, within DvMF_1692 at 2060.947 kb on - strand, within DvMF_1692 at 2061.013 kb on + strand, within DvMF_1692 at 2061.243 kb on - strand, within DvMF_1692 at 2061.413 kb on - strand, within DvMF_1692 at 2061.433 kb on - strand, within DvMF_1692 at 2061.493 kb on + strand, within DvMF_1692 at 2061.529 kb on - strand, within DvMF_1692 at 2061.698 kb on + strand at 2061.706 kb on - strand at 2061.748 kb on - strand at 2061.763 kb on + strand at 2061.763 kb on + strand at 2061.878 kb on + strand at 2061.939 kb on + strand at 2062.372 kb on - strand at 2062.417 kb on + strand at 2062.439 kb on + strand at 2062.643 kb on + strand, within DvMF_1693 at 2062.675 kb on + strand, within DvMF_1693 at 2062.748 kb on - strand, within DvMF_1693
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 2,059,395 + +0.0 2,059,547 - -0.4 2,059,917 + DvMF_1691 0.81 +0.1 2,060,222 + -1.4 2,060,376 + +0.1 2,060,531 - DvMF_1692 0.16 -0.5 2,060,947 - DvMF_1692 0.42 -0.7 2,061,013 + DvMF_1692 0.46 -0.2 2,061,243 - DvMF_1692 0.61 +0.5 2,061,413 - DvMF_1692 0.72 -0.1 2,061,433 - DvMF_1692 0.73 -0.9 2,061,493 + DvMF_1692 0.77 +0.1 2,061,529 - DvMF_1692 0.79 -0.6 2,061,698 + -4.7 2,061,706 - -0.2 2,061,748 - -0.1 2,061,763 + -1.1 2,061,763 + +0.1 2,061,878 + -0.6 2,061,939 + -3.9 2,062,372 - -0.7 2,062,417 + +0.2 2,062,439 + -2.1 2,062,643 + DvMF_1693 0.19 -0.0 2,062,675 + DvMF_1693 0.21 -0.2 2,062,748 - DvMF_1693 0.25 -2.7
Or see this region's nucleotide sequence