Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1390 and DvMF_1391 are separated by 405 nucleotides DvMF_1391 and DvMF_1392 overlap by 4 nucleotides DvMF_1392 and DvMF_1393 are separated by 200 nucleotides
DvMF_1390: DvMF_1390 - redox-sensing transcriptional repressor Rex (RefSeq), at 1,697,385 to 1,698,032
_1390
DvMF_1391: DvMF_1391 - protein of unknown function DUF62 (RefSeq), at 1,698,438 to 1,699,325
_1391
DvMF_1392: DvMF_1392 - cobalamin-5-phosphate synthase CobS (RefSeq), at 1,699,322 to 1,700,077
_1392
DvMF_1393: DvMF_1393 - flagellar export protein FliJ (RefSeq), at 1,700,278 to 1,700,718
_1393
Position (kb)
1698
1699
1700 Strain fitness (log2 ratio)
-2
-1
0
1 at 1698.108 kb on + strand at 1698.233 kb on - strand at 1698.337 kb on - strand at 1698.435 kb on + strand at 1698.524 kb on + strand at 1698.532 kb on + strand, within DvMF_1391 at 1698.593 kb on + strand, within DvMF_1391 at 1698.725 kb on - strand, within DvMF_1391 at 1698.726 kb on + strand, within DvMF_1391 at 1698.815 kb on - strand, within DvMF_1391 at 1698.876 kb on - strand, within DvMF_1391 at 1698.876 kb on - strand, within DvMF_1391 at 1699.285 kb on - strand at 1699.359 kb on + strand at 1700.085 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 1,698,108 + -0.4 1,698,233 - +0.3 1,698,337 - -2.7 1,698,435 + -0.8 1,698,524 + -1.6 1,698,532 + DvMF_1391 0.11 +0.2 1,698,593 + DvMF_1391 0.17 -0.5 1,698,725 - DvMF_1391 0.32 +0.9 1,698,726 + DvMF_1391 0.32 -0.5 1,698,815 - DvMF_1391 0.42 -0.4 1,698,876 - DvMF_1391 0.49 -0.3 1,698,876 - DvMF_1391 0.49 -0.8 1,699,285 - -0.9 1,699,359 + +0.8 1,700,085 - -2.5
Or see this region's nucleotide sequence