Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0676 and DvMF_0677 overlap by 4 nucleotides DvMF_0677 and DvMF_0678 overlap by 4 nucleotides
DvMF_0676: DvMF_0676 - glycosyl transferase group 1 (RefSeq), at 815,337 to 816,461
_0676
DvMF_0677: DvMF_0677 - glycosyl transferase group 1 (RefSeq), at 816,458 to 817,651
_0677
DvMF_0678: DvMF_0678 - polysaccharide biosynthesis protein (RefSeq), at 817,648 to 819,147
_0678
Position (kb) 816
817
818 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 815.541 kb on + strand, within DvMF_0676 at 815.568 kb on - strand, within DvMF_0676 at 815.575 kb on - strand, within DvMF_0676 at 815.662 kb on + strand, within DvMF_0676 at 816.000 kb on - strand, within DvMF_0676 at 816.273 kb on + strand, within DvMF_0676 at 816.281 kb on - strand, within DvMF_0676 at 816.419 kb on + strand at 816.456 kb on + strand at 816.727 kb on + strand, within DvMF_0677 at 816.727 kb on + strand, within DvMF_0677 at 817.009 kb on - strand, within DvMF_0677 at 817.207 kb on - strand, within DvMF_0677 at 817.259 kb on + strand, within DvMF_0677 at 817.266 kb on + strand, within DvMF_0677 at 817.374 kb on - strand, within DvMF_0677 at 817.492 kb on + strand, within DvMF_0677 at 817.641 kb on + strand at 817.663 kb on - strand at 817.881 kb on + strand, within DvMF_0678 at 817.918 kb on + strand, within DvMF_0678 at 817.926 kb on - strand, within DvMF_0678 at 818.322 kb on + strand, within DvMF_0678 at 818.322 kb on + strand, within DvMF_0678 at 818.387 kb on + strand, within DvMF_0678 at 818.395 kb on - strand, within DvMF_0678 at 818.461 kb on - strand, within DvMF_0678 at 818.485 kb on + strand, within DvMF_0678 at 818.564 kb on - strand, within DvMF_0678 at 818.601 kb on + strand, within DvMF_0678 at 818.601 kb on + strand, within DvMF_0678 at 818.609 kb on - strand, within DvMF_0678
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 815,541 + DvMF_0676 0.18 -0.8 815,568 - DvMF_0676 0.21 -0.1 815,575 - DvMF_0676 0.21 -0.6 815,662 + DvMF_0676 0.29 -3.5 816,000 - DvMF_0676 0.59 -1.7 816,273 + DvMF_0676 0.83 -0.6 816,281 - DvMF_0676 0.84 -1.2 816,419 + -4.4 816,456 + -0.7 816,727 + DvMF_0677 0.23 -0.6 816,727 + DvMF_0677 0.23 -1.3 817,009 - DvMF_0677 0.46 -1.1 817,207 - DvMF_0677 0.63 -0.0 817,259 + DvMF_0677 0.67 +0.9 817,266 + DvMF_0677 0.68 -2.0 817,374 - DvMF_0677 0.77 -2.1 817,492 + DvMF_0677 0.87 -0.4 817,641 + -2.7 817,663 - -0.6 817,881 + DvMF_0678 0.16 +0.1 817,918 + DvMF_0678 0.18 -0.6 817,926 - DvMF_0678 0.19 -0.9 818,322 + DvMF_0678 0.45 -0.4 818,322 + DvMF_0678 0.45 -1.5 818,387 + DvMF_0678 0.49 -0.7 818,395 - DvMF_0678 0.50 -1.2 818,461 - DvMF_0678 0.54 -0.6 818,485 + DvMF_0678 0.56 -0.2 818,564 - DvMF_0678 0.61 +0.8 818,601 + DvMF_0678 0.64 -0.6 818,601 + DvMF_0678 0.64 -0.2 818,609 - DvMF_0678 0.64 -0.6
Or see this region's nucleotide sequence