Experiment: MoYLS4 with Aluminum chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0060 and DvMF_0061 are separated by 102 nucleotides DvMF_0061 and DvMF_0062 are separated by 33 nucleotides DvMF_0062 and DvMF_0063 are separated by 158 nucleotides DvMF_0063 and DvMF_0064 overlap by 4 nucleotides
DvMF_0060: DvMF_0060 - UTP-glucose-1-phosphate uridylyltransferase (RefSeq), at 78,141 to 79,016
_0060
DvMF_0061: DvMF_0061 - primosomal protein N' (RefSeq), at 79,119 to 81,539
_0061
DvMF_0062: DvMF_0062 - hypothetical protein (RefSeq), at 81,573 to 81,740
_0062
DvMF_0063: DvMF_0063 - response regulator receiver protein (RefSeq), at 81,899 to 82,291
_0063
DvMF_0064: DvMF_0064 - histidine kinase (RefSeq), at 82,288 to 84,084
_0064
Position (kb) 79
80
81
82 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 78.364 kb on - strand, within DvMF_0060 at 78.802 kb on - strand, within DvMF_0060 at 78.918 kb on - strand, within DvMF_0060 at 78.952 kb on + strand at 79.024 kb on - strand at 81.610 kb on + strand, within DvMF_0062 at 81.671 kb on - strand, within DvMF_0062 at 81.896 kb on + strand at 82.023 kb on - strand, within DvMF_0063 at 82.325 kb on + strand at 82.484 kb on + strand, within DvMF_0064 at 82.538 kb on + strand, within DvMF_0064
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Aluminum chloride 10 mM remove 78,364 - DvMF_0060 0.25 +0.1 78,802 - DvMF_0060 0.75 -0.4 78,918 - DvMF_0060 0.89 -0.1 78,952 + -0.4 79,024 - +0.3 81,610 + DvMF_0062 0.22 -0.1 81,671 - DvMF_0062 0.58 -2.8 81,896 + -0.3 82,023 - DvMF_0063 0.32 -1.0 82,325 + -0.5 82,484 + DvMF_0064 0.11 -0.4 82,538 + DvMF_0064 0.14 +0.2
Or see this region's nucleotide sequence