Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08470

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,885,768	+		PFLU_RS08460	0.25	+0.3
1,885,768	+		PFLU_RS08460	0.25	-1.7
1,885,769	-		PFLU_RS08460	0.25	-1.5
1,885,779	+		PFLU_RS08460	0.26	-1.2
1,885,928	-		PFLU_RS08460	0.44	+1.2
1,886,094	+		PFLU_RS08460	0.63	-0.3
1,886,094	+		PFLU_RS08460	0.63	+0.4
1,886,094	+		PFLU_RS08460	0.63	-0.1
1,886,094	+		PFLU_RS08460	0.63	+1.0
1,886,094	+		PFLU_RS08460	0.63	-2.7
1,886,095	-		PFLU_RS08460	0.63	-2.0
1,886,095	-		PFLU_RS08460	0.63	+0.9
1,886,095	-		PFLU_RS08460	0.63	+1.5
1,886,095	-		PFLU_RS08460	0.63	+1.5
1,886,095	-		PFLU_RS08460	0.63	-2.1
1,886,095	-		PFLU_RS08460	0.63	-1.3
1,886,095	-		PFLU_RS08460	0.63	+1.7
1,886,095	-		PFLU_RS08460	0.63	+1.0
1,886,201	+		PFLU_RS08460	0.75	-0.5
1,886,201	+		PFLU_RS08460	0.75	-0.1
1,886,201	+		PFLU_RS08460	0.75	-1.3
1,886,201	+		PFLU_RS08460	0.75	-1.1
1,886,201	+		PFLU_RS08460	0.75	+1.4
1,886,201	+		PFLU_RS08460	0.75	-0.5
1,886,202	-		PFLU_RS08460	0.76	+0.3
1,886,202	-		PFLU_RS08460	0.76	-2.7
1,886,202	-		PFLU_RS08460	0.76	+4.3
1,886,202	-		PFLU_RS08460	0.76	+0.6
1,886,202	-		PFLU_RS08460	0.76	-0.3
1,886,293	+		PFLU_RS08460	0.86	-1.8
1,886,293	+		PFLU_RS08460	0.86	-2.7
1,886,293	+		PFLU_RS08460	0.86	+0.6
1,886,293	+		PFLU_RS08460	0.86	+0.4
1,886,293	+		PFLU_RS08460	0.86	+0.3
1,886,293	+		PFLU_RS08460	0.86	+0.5
1,886,294	-		PFLU_RS08460	0.86	+0.8
1,886,294	-		PFLU_RS08460	0.86	+1.4
1,886,294	-		PFLU_RS08460	0.86	+0.5
1,886,294	-		PFLU_RS08460	0.86	+0.5
1,886,294	-		PFLU_RS08460	0.86	+0.1
1,886,311	+		PFLU_RS08460	0.88	+0.3
1,886,312	-		PFLU_RS08460	0.88	+0.5
1,886,430	+				-0.1
1,886,430	+				-2.3
1,886,433	+				-0.3
1,886,433	+				-1.3
1,886,433	+				+1.1
1,886,434	-				+1.5
1,886,438	-				+2.7
1,886,438	-				-0.5
1,886,530	+		PFLU_RS08465	0.36	+0.9
1,886,530	+		PFLU_RS08465	0.36	+1.6
1,886,530	+		PFLU_RS08465	0.36	+0.1
1,886,530	+		PFLU_RS08465	0.36	+0.5
1,886,530	+		PFLU_RS08465	0.36	-0.9
1,886,530	+		PFLU_RS08465	0.36	+0.6
1,886,530	+		PFLU_RS08465	0.36	+1.5
1,886,530	+		PFLU_RS08465	0.36	-1.9
1,886,530	+		PFLU_RS08465	0.36	+1.5
1,886,530	+		PFLU_RS08465	0.36	-2.3
1,886,530	+		PFLU_RS08465	0.36	+0.9
1,886,530	+		PFLU_RS08465	0.36	+0.5
1,886,530	+		PFLU_RS08465	0.36	+1.8
1,886,530	+		PFLU_RS08465	0.36	+1.5
1,886,531	-		PFLU_RS08465	0.36	-0.8
1,886,531	-		PFLU_RS08465	0.36	+1.9
1,886,531	-		PFLU_RS08465	0.36	+0.2
1,886,531	-		PFLU_RS08465	0.36	+0.7
1,886,531	-		PFLU_RS08465	0.36	-0.2
1,886,531	-		PFLU_RS08465	0.36	-0.3
1,886,531	-		PFLU_RS08465	0.36	-0.1
1,886,531	-		PFLU_RS08465	0.36	+1.5
1,886,531	-		PFLU_RS08465	0.36	-1.4
1,886,531	-		PFLU_RS08465	0.36	+0.2
1,886,531	-		PFLU_RS08465	0.36	-2.7
1,886,728	-				-0.1
1,886,728	-				+1.5
1,886,934	+		PFLU_RS08470	0.14	-0.8
1,886,934	+		PFLU_RS08470	0.14	+1.1
1,886,934	+		PFLU_RS08470	0.14	+0.3
1,886,934	+		PFLU_RS08470	0.14	+0.2
1,886,934	+		PFLU_RS08470	0.14	+0.7
1,886,935	-		PFLU_RS08470	0.14	+0.5
1,886,935	-		PFLU_RS08470	0.14	-1.5
1,886,964	+		PFLU_RS08470	0.17	-2.0
1,886,964	+		PFLU_RS08470	0.17	+0.4
1,886,964	+		PFLU_RS08470	0.17	+0.5
1,886,964	+		PFLU_RS08470	0.17	-1.1
1,886,964	+		PFLU_RS08470	0.17	+0.6
1,886,964	+		PFLU_RS08470	0.17	-0.1
1,886,964	+		PFLU_RS08470	0.17	-0.1
1,886,964	+		PFLU_RS08470	0.17	+0.5
1,886,964	+		PFLU_RS08470	0.17	+1.6
1,886,964	+		PFLU_RS08470	0.17	+0.5
1,886,964	+		PFLU_RS08470	0.17	-0.3
1,886,965	-		PFLU_RS08470	0.17	-0.4
1,886,965	-		PFLU_RS08470	0.17	-1.1
1,886,965	-		PFLU_RS08470	0.17	-1.1
1,886,965	-		PFLU_RS08470	0.17	+1.0
1,886,965	-		PFLU_RS08470	0.17	-2.1
1,886,965	-		PFLU_RS08470	0.17	-1.0
1,886,965	-		PFLU_RS08470	0.17	+0.1
1,886,965	-		PFLU_RS08470	0.17	+1.5
1,886,977	+		PFLU_RS08470	0.18	-3.0
1,886,977	+		PFLU_RS08470	0.18	+0.7
1,886,977	+		PFLU_RS08470	0.18	+0.5
1,886,977	+		PFLU_RS08470	0.18	-2.8
1,886,977	+		PFLU_RS08470	0.18	+0.6
1,886,977	+		PFLU_RS08470	0.18	+0.3
1,886,977	+		PFLU_RS08470	0.18	-1.1
1,886,978	-		PFLU_RS08470	0.18	-2.0
1,886,978	-		PFLU_RS08470	0.18	+0.2
1,886,978	-		PFLU_RS08470	0.18	+0.3
1,886,978	-		PFLU_RS08470	0.18	+1.5
1,887,117	+		PFLU_RS08470	0.29	-1.5
1,887,118	-		PFLU_RS08470	0.29	-0.5
1,887,118	-		PFLU_RS08470	0.29	+0.1
1,887,118	-		PFLU_RS08470	0.29	+0.4
1,887,118	-		PFLU_RS08470	0.29	-0.7
1,887,336	+		PFLU_RS08470	0.47	-0.8
1,887,336	+		PFLU_RS08470	0.47	-0.7
1,887,337	-		PFLU_RS08470	0.47	-0.5
1,887,337	-		PFLU_RS08470	0.47	-0.4
1,887,428	+		PFLU_RS08470	0.54	+0.7
1,887,429	-		PFLU_RS08470	0.54	-0.8
1,887,429	-		PFLU_RS08470	0.54	-1.0
1,887,429	-		PFLU_RS08470	0.54	+1.3
1,887,468	+		PFLU_RS08470	0.58	-2.1
1,887,468	+		PFLU_RS08470	0.58	+0.7
1,887,468	+		PFLU_RS08470	0.58	-0.1
1,887,468	+		PFLU_RS08470	0.58	-0.1
1,887,468	+		PFLU_RS08470	0.58	+0.2
1,887,469	-		PFLU_RS08470	0.58	-0.7
1,887,469	-		PFLU_RS08470	0.58	+0.5
1,887,469	-		PFLU_RS08470	0.58	+0.4
1,887,469	-		PFLU_RS08470	0.58	-1.8
1,887,547	+		PFLU_RS08470	0.64	+2.8
1,887,547	+		PFLU_RS08470	0.64	+0.2
1,887,547	+		PFLU_RS08470	0.64	-0.9
1,887,548	-		PFLU_RS08470	0.64	+1.5
1,887,548	-		PFLU_RS08470	0.64	+0.5
1,887,548	-		PFLU_RS08470	0.64	-0.4
1,887,548	-		PFLU_RS08470	0.64	-0.8
1,887,548	-		PFLU_RS08470	0.64	-0.7
1,887,570	+		PFLU_RS08470	0.66	-1.5
1,887,570	+		PFLU_RS08470	0.66	-0.2
1,887,571	-		PFLU_RS08470	0.66	+1.8
1,887,571	-		PFLU_RS08470	0.66	+1.5
1,887,571	-		PFLU_RS08470	0.66	+0.8
1,887,571	-		PFLU_RS08470	0.66	-1.5
1,887,699	+		PFLU_RS08470	0.76	+0.2
1,887,699	+		PFLU_RS08470	0.76	-0.5
1,887,699	+		PFLU_RS08470	0.76	-1.6
1,887,699	+		PFLU_RS08470	0.76	+1.3
1,887,699	+		PFLU_RS08470	0.76	+0.3
1,887,699	+		PFLU_RS08470	0.76	+0.4
1,887,699	+		PFLU_RS08470	0.76	-0.6
1,887,699	+		PFLU_RS08470	0.76	+1.5
1,887,699	+		PFLU_RS08470	0.76	-2.1
1,887,699	+		PFLU_RS08470	0.76	+0.0
1,887,699	+		PFLU_RS08470	0.76	+0.9
1,887,699	+		PFLU_RS08470	0.76	+0.2
1,887,699	+		PFLU_RS08470	0.76	+0.7
1,887,699	+		PFLU_RS08470	0.76	+0.4
1,887,699	+		PFLU_RS08470	0.76	+1.5
1,887,699	+		PFLU_RS08470	0.76	+1.1
1,887,700	-		PFLU_RS08470	0.76	+0.5
1,887,700	-		PFLU_RS08470	0.76	-1.4
1,887,700	-		PFLU_RS08470	0.76	-0.1
1,887,700	-		PFLU_RS08470	0.76	+0.8
1,887,700	-		PFLU_RS08470	0.76	-2.5
1,887,700	-		PFLU_RS08470	0.76	+0.6
1,887,700	-		PFLU_RS08470	0.76	-0.1
1,887,700	-		PFLU_RS08470	0.76	-1.7
1,887,700	-		PFLU_RS08470	0.76	-0.8
1,887,700	-		PFLU_RS08470	0.76	-0.2
1,887,700	-		PFLU_RS08470	0.76	+0.0
1,887,700	-		PFLU_RS08470	0.76	+1.3
1,887,700	-		PFLU_RS08470	0.76	-0.1
1,887,700	-		PFLU_RS08470	0.76	-2.6
1,887,723	+		PFLU_RS08470	0.78	+0.6
1,887,724	-		PFLU_RS08470	0.78	-0.0
1,887,724	-		PFLU_RS08470	0.78	+1.2
1,887,724	-		PFLU_RS08470	0.78	-2.1
1,887,724	-		PFLU_RS08470	0.78	-1.5
1,887,724	-		PFLU_RS08470	0.78	-0.7
1,887,724	-		PFLU_RS08470	0.78	-0.5
1,887,729	+		PFLU_RS08470	0.79	-3.1
1,887,732	+		PFLU_RS08470	0.79	-1.6
1,887,732	+		PFLU_RS08470	0.79	-0.2
1,887,732	+		PFLU_RS08470	0.79	+0.8
1,887,732	+		PFLU_RS08470	0.79	-0.2
1,887,732	+		PFLU_RS08470	0.79	-0.2
1,887,732	+		PFLU_RS08470	0.79	-1.9
1,887,732	+		PFLU_RS08470	0.79	+0.6
1,887,732	+		PFLU_RS08470	0.79	-1.1
1,887,732	+		PFLU_RS08470	0.79	-1.7
1,887,732	+		PFLU_RS08470	0.79	+1.5
1,887,732	+		PFLU_RS08470	0.79	+0.7
1,887,732	+		PFLU_RS08470	0.79	-0.5
1,887,732	+		PFLU_RS08470	0.79	-0.4
1,887,732	+		PFLU_RS08470	0.79	+0.2
1,887,732	+		PFLU_RS08470	0.79	-1.3
1,887,732	+		PFLU_RS08470	0.79	-1.8
1,887,732	+		PFLU_RS08470	0.79	-1.5
1,887,733	-		PFLU_RS08470	0.79	-1.9
1,887,733	-		PFLU_RS08470	0.79	+2.1
1,887,733	-		PFLU_RS08470	0.79	+0.3
1,887,733	-		PFLU_RS08470	0.79	-1.5
1,887,733	-		PFLU_RS08470	0.79	+1.5
1,887,733	-		PFLU_RS08470	0.79	-0.3
1,887,733	-		PFLU_RS08470	0.79	+0.0
1,887,733	-		PFLU_RS08470	0.79	-0.2
1,887,733	-		PFLU_RS08470	0.79	-3.5
1,887,733	-		PFLU_RS08470	0.79	+0.3
1,887,781	+		PFLU_RS08470	0.83	-1.3
1,887,782	-		PFLU_RS08470	0.83	+0.8
1,887,987	+				+0.3
1,887,988	-				+0.7
1,888,004	+				-0.7
1,888,004	+				+0.2
1,888,031	+				-0.8
1,888,031	+				+1.0
1,888,031	+				+1.3
1,888,031	+				+1.0
1,888,031	+				-0.7
1,888,032	-				+1.2
1,888,032	-				+0.9
1,888,032	-				-1.3
1,888,032	-				+0.8
1,888,032	-				-1.6
1,888,032	-				-2.4
1,888,032	-				+0.5
1,888,043	+				-0.6
1,888,043	+				+0.2
1,888,043	+				-2.2
1,888,043	+				+0.1
1,888,043	+				-2.2
1,888,043	+				-2.8
1,888,043	+				-0.8
1,888,043	+				-0.2
1,888,043	+				+0.3
1,888,043	+				-0.9
1,888,043	+				+0.5
1,888,043	+				-0.7
1,888,043	+				-0.5
1,888,043	+				-0.4
1,888,043	+				-1.3
1,888,043	+				-1.6
1,888,043	+				+0.8
1,888,044	-				+0.9
1,888,044	-				+0.5
1,888,044	-				-0.1
1,888,044	-				+0.4
1,888,044	-				+0.5
1,888,044	-				-0.2
1,888,044	-				-1.3
1,888,044	-				-2.6
1,888,044	-				+0.9
1,888,044	-				-1.7
1,888,044	-				+0.1
1,888,044	-				+2.9
1,888,044	-				-0.1
1,888,044	-				-1.3
1,888,044	-				-2.8
1,888,051	+				-1.3
1,888,051	+				-1.8
1,888,051	+				-2.0
1,888,051	+				-1.7
1,888,051	+				+0.7
1,888,051	+				+0.6
1,888,051	+				-1.0
1,888,051	+				-1.8
1,888,051	+				-0.2
1,888,051	+				-1.2
1,888,051	+				-0.2
1,888,051	+				-1.8
1,888,051	+				+0.7
1,888,051	+				+2.2
1,888,051	+				+1.2
1,888,051	+				-0.8
1,888,051	+				+1.3
1,888,051	+				+0.9
1,888,051	+				+0.1
1,888,051	+				-1.3
1,888,052	-				-2.0
1,888,052	-				+0.2
1,888,052	-				-1.3
1,888,052	-				+0.3
1,888,052	-				+0.5
1,888,052	-				+1.6
1,888,052	-				+0.6
1,888,052	-				-0.1
1,888,052	-				-0.3
1,888,052	-				+0.6
1,888,052	-				-0.1
1,888,052	-				-0.6
1,888,052	-				+1.9
1,888,052	-				+1.0
1,888,052	-				+0.6
1,888,052	-				-0.9
1,888,113	+				-1.2
1,888,114	-				+0.6
1,888,114	-				+1.4
1,888,114	-				+0.6
1,888,212	+				-0.6
1,888,308	+		PFLU_RS08475	0.14	+0.9
1,888,308	+		PFLU_RS08475	0.14	-0.8
1,888,308	+		PFLU_RS08475	0.14	+0.6
1,888,308	+		PFLU_RS08475	0.14	-2.6
1,888,308	+		PFLU_RS08475	0.14	+1.0
1,888,308	+		PFLU_RS08475	0.14	+0.1
1,888,308	+		PFLU_RS08475	0.14	-1.0
1,888,308	+		PFLU_RS08475	0.14	-0.3
1,888,308	+		PFLU_RS08475	0.14	+0.3
1,888,309	-		PFLU_RS08475	0.14	+0.4
1,888,309	-		PFLU_RS08475	0.14	+1.2
1,888,383	+		PFLU_RS08475	0.19	-0.5
1,888,384	-		PFLU_RS08475	0.20	+1.5
1,888,444	+		PFLU_RS08475	0.24	-1.4
1,888,444	+		PFLU_RS08475	0.24	-2.6
1,888,444	+		PFLU_RS08475	0.24	-2.8
1,888,445	-		PFLU_RS08475	0.24	+0.3
1,888,445	-		PFLU_RS08475	0.24	-0.7
1,888,445	-		PFLU_RS08475	0.24	-0.9
1,888,445	-		PFLU_RS08475	0.24	-1.7
1,888,445	-		PFLU_RS08475	0.24	+0.8
1,888,445	-		PFLU_RS08475	0.24	-1.9
1,888,445	-		PFLU_RS08475	0.24	+0.6
1,888,445	-		PFLU_RS08475	0.24	+1.2
1,888,445	-		PFLU_RS08475	0.24	-0.5
1,888,445	-		PFLU_RS08475	0.24	-2.0
1,888,704	+		PFLU_RS08475	0.43	+1.2
1,888,704	+		PFLU_RS08475	0.43	+0.1
1,888,704	+		PFLU_RS08475	0.43	-2.2
1,888,704	+		PFLU_RS08475	0.43	-0.3
1,888,704	+		PFLU_RS08475	0.43	-0.8
1,888,704	+		PFLU_RS08475	0.43	-0.4
1,888,704	+		PFLU_RS08475	0.43	-0.3
1,888,704	+		PFLU_RS08475	0.43	+0.9
1,888,704	+		PFLU_RS08475	0.43	-1.8
1,888,704	+		PFLU_RS08475	0.43	-0.1
1,888,705	-		PFLU_RS08475	0.43	-1.7
1,888,705	-		PFLU_RS08475	0.43	-0.5
1,888,705	-		PFLU_RS08475	0.43	-2.0
1,888,705	-		PFLU_RS08475	0.43	+0.5
1,888,705	-		PFLU_RS08475	0.43	+1.0
1,888,707	+		PFLU_RS08475	0.44	-0.5
1,888,707	+		PFLU_RS08475	0.44	-1.9
1,888,707	+		PFLU_RS08475	0.44	-1.1
1,888,707	+		PFLU_RS08475	0.44	+1.0
1,888,707	+		PFLU_RS08475	0.44	-0.5
1,888,707	+		PFLU_RS08475	0.44	+0.6
1,888,707	+		PFLU_RS08475	0.44	+0.0
1,888,707	+		PFLU_RS08475	0.44	+0.0
1,888,708	-		PFLU_RS08475	0.44	-2.1
1,888,708	-		PFLU_RS08475	0.44	+0.2
1,888,708	-		PFLU_RS08475	0.44	-1.7
1,888,708	-		PFLU_RS08475	0.44	-0.1
1,888,708	-		PFLU_RS08475	0.44	+0.1
1,888,708	-		PFLU_RS08475	0.44	+1.0
1,888,708	-		PFLU_RS08475	0.44	+0.2
1,888,708	-		PFLU_RS08475	0.44	-2.0
1,888,708	-		PFLU_RS08475	0.44	+0.2
1,888,749	+		PFLU_RS08475	0.47	+0.4
1,888,749	+		PFLU_RS08475	0.47	-2.2
1,888,749	+		PFLU_RS08475	0.47	-0.4
1,888,749	+		PFLU_RS08475	0.47	-0.7
1,888,749	+		PFLU_RS08475	0.47	-0.1
1,888,749	+		PFLU_RS08475	0.47	-3.1
1,888,750	-		PFLU_RS08475	0.47	-0.0
1,888,750	-		PFLU_RS08475	0.47	+2.0
1,888,750	-		PFLU_RS08475	0.47	-0.2
1,888,872	+		PFLU_RS08475	0.56	+1.1
1,888,872	+		PFLU_RS08475	0.56	-0.8