Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17850

Experiment: Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17845 and ABZR86_RS17850 are separated by 191 nucleotidesABZR86_RS17850 and ABZR86_RS17855 are separated by 217 nucleotides ABZR86_RS17845: ABZR86_RS17845 - N-acetylmuramidase domain-containing protein, at 4,024,705 to 4,025,958 _RS17845 ABZR86_RS17850: ABZR86_RS17850 - YceI family protein, at 4,026,150 to 4,026,779 _RS17850 ABZR86_RS17855: ABZR86_RS17855 - winged helix-turn-helix domain-containing protein, at 4,026,997 to 4,027,905 _RS17855 Position (kb) 4026 4027Strain fitness (log2 ratio) -2 -1 0 1at 4025.247 kb on - strand, within ABZR86_RS17845at 4025.302 kb on + strand, within ABZR86_RS17845at 4025.303 kb on - strand, within ABZR86_RS17845at 4025.491 kb on + strand, within ABZR86_RS17845at 4025.492 kb on - strand, within ABZR86_RS17845at 4025.492 kb on - strand, within ABZR86_RS17845at 4025.509 kb on + strand, within ABZR86_RS17845at 4025.510 kb on - strand, within ABZR86_RS17845at 4025.614 kb on + strand, within ABZR86_RS17845at 4025.615 kb on - strand, within ABZR86_RS17845at 4025.615 kb on - strand, within ABZR86_RS17845at 4025.615 kb on - strand, within ABZR86_RS17845at 4025.615 kb on - strand, within ABZR86_RS17845at 4025.615 kb on - strand, within ABZR86_RS17845at 4025.620 kb on + strand, within ABZR86_RS17845at 4025.620 kb on + strand, within ABZR86_RS17845at 4025.621 kb on - strand, within ABZR86_RS17845at 4025.621 kb on - strand, within ABZR86_RS17845at 4025.704 kb on + strand, within ABZR86_RS17845at 4025.749 kb on + strand, within ABZR86_RS17845at 4025.749 kb on + strand, within ABZR86_RS17845at 4025.750 kb on - strand, within ABZR86_RS17845at 4025.845 kb on + strandat 4025.975 kb on - strandat 4026.152 kb on - strandat 4026.230 kb on + strand, within ABZR86_RS17850at 4026.230 kb on + strand, within ABZR86_RS17850at 4026.259 kb on - strand, within ABZR86_RS17850at 4026.557 kb on - strand, within ABZR86_RS17850at 4026.557 kb on - strand, within ABZR86_RS17850at 4026.712 kb on + strand, within ABZR86_RS17850at 4026.712 kb on + strand, within ABZR86_RS17850at 4026.712 kb on + strand, within ABZR86_RS17850at 4026.713 kb on - strand, within ABZR86_RS17850at 4026.713 kb on - strand, within ABZR86_RS17850at 4026.955 kb on + strandat 4026.994 kb on + strandat 4026.994 kb on + strandat 4026.994 kb on + strandat 4026.994 kb on + strandat 4026.995 kb on - strandat 4026.995 kb on - strandat 4026.995 kb on - strandat 4027.223 kb on - strand, within ABZR86_RS17855at 4027.279 kb on + strand, within ABZR86_RS17855at 4027.280 kb on - strand, within ABZR86_RS17855at 4027.280 kb on - strand, within ABZR86_RS17855at 4027.280 kb on - strand, within ABZR86_RS17855at 4027.281 kb on + strand, within ABZR86_RS17855at 4027.663 kb on + strand, within ABZR86_RS17855at 4027.666 kb on + strand, within ABZR86_RS17855at 4027.721 kb on - strand, within ABZR86_RS17855at 4027.721 kb on - strand, within ABZR86_RS17855

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml
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4,025,247 - ABZR86_RS17845 0.43 +1.3
4,025,302 + ABZR86_RS17845 0.48 -0.3
4,025,303 - ABZR86_RS17845 0.48 -0.2
4,025,491 + ABZR86_RS17845 0.63 +0.4
4,025,492 - ABZR86_RS17845 0.63 +0.0
4,025,492 - ABZR86_RS17845 0.63 +1.0
4,025,509 + ABZR86_RS17845 0.64 -0.0
4,025,510 - ABZR86_RS17845 0.64 -0.1
4,025,614 + ABZR86_RS17845 0.72 +0.1
4,025,615 - ABZR86_RS17845 0.73 -0.6
4,025,615 - ABZR86_RS17845 0.73 -0.0
4,025,615 - ABZR86_RS17845 0.73 -0.0
4,025,615 - ABZR86_RS17845 0.73 -1.2
4,025,615 - ABZR86_RS17845 0.73 +0.4
4,025,620 + ABZR86_RS17845 0.73 -0.3
4,025,620 + ABZR86_RS17845 0.73 -1.0
4,025,621 - ABZR86_RS17845 0.73 -1.1
4,025,621 - ABZR86_RS17845 0.73 +0.8
4,025,704 + ABZR86_RS17845 0.80 -0.1
4,025,749 + ABZR86_RS17845 0.83 -0.2
4,025,749 + ABZR86_RS17845 0.83 +0.1
4,025,750 - ABZR86_RS17845 0.83 -0.2
4,025,845 + +0.1
4,025,975 - -1.0
4,026,152 - -0.1
4,026,230 + ABZR86_RS17850 0.13 -0.4
4,026,230 + ABZR86_RS17850 0.13 +1.7
4,026,259 - ABZR86_RS17850 0.17 -0.1
4,026,557 - ABZR86_RS17850 0.65 -1.8
4,026,557 - ABZR86_RS17850 0.65 -0.0
4,026,712 + ABZR86_RS17850 0.89 +0.8
4,026,712 + ABZR86_RS17850 0.89 +0.1
4,026,712 + ABZR86_RS17850 0.89 +0.2
4,026,713 - ABZR86_RS17850 0.89 +0.5
4,026,713 - ABZR86_RS17850 0.89 -0.0
4,026,955 + +0.7
4,026,994 + +0.4
4,026,994 + -0.6
4,026,994 + -0.2
4,026,994 + -1.3
4,026,995 - +0.2
4,026,995 - +0.5
4,026,995 - +0.5
4,027,223 - ABZR86_RS17855 0.25 +0.1
4,027,279 + ABZR86_RS17855 0.31 +0.6
4,027,280 - ABZR86_RS17855 0.31 -0.5
4,027,280 - ABZR86_RS17855 0.31 -0.9
4,027,280 - ABZR86_RS17855 0.31 +0.4
4,027,281 + ABZR86_RS17855 0.31 +0.2
4,027,663 + ABZR86_RS17855 0.73 +0.1
4,027,666 + ABZR86_RS17855 0.74 -0.8
4,027,721 - ABZR86_RS17855 0.80 -0.2
4,027,721 - ABZR86_RS17855 0.80 -0.7

Or see this region's nucleotide sequence