Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3811

Experiment: Chloride 300 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 300 mM
4,221,674	-		Pf1N1B4_3810	0.55	-1.2
4,221,674	-		Pf1N1B4_3810	0.55	-0.2
4,221,685	+		Pf1N1B4_3810	0.56	-2.0
4,221,686	-		Pf1N1B4_3810	0.56	+1.8
4,221,718	+		Pf1N1B4_3810	0.60	+0.8
4,221,718	+		Pf1N1B4_3810	0.60	+0.4
4,221,737	+		Pf1N1B4_3810	0.62	+0.3
4,221,910	+		Pf1N1B4_3810	0.81	-1.1
4,221,952	+		Pf1N1B4_3810	0.85	-1.5
4,221,952	+		Pf1N1B4_3810	0.85	-0.2
4,221,979	+		Pf1N1B4_3810	0.88	+0.8
4,221,979	+		Pf1N1B4_3810	0.88	-2.4
4,221,979	+		Pf1N1B4_3810	0.88	-1.2
4,221,979	+		Pf1N1B4_3810	0.88	-0.1
4,221,980	-		Pf1N1B4_3810	0.88	-0.8
4,221,983	-		Pf1N1B4_3810	0.88	+1.2
4,222,123	+				-0.3
4,222,124	-				+1.4
4,222,148	+				-0.5
4,222,149	-				+0.1
4,222,149	-				-0.2
4,222,149	-				-0.2
4,222,149	-				-2.4
4,222,156	-				+0.8
4,222,156	-				-0.8
4,222,156	-				-2.7
4,222,172	-				-0.8
4,222,207	-				-0.3
4,222,207	-				+0.1
4,222,247	-				-1.0
4,222,247	-				+1.6
4,222,247	-				-0.2
4,222,303	+				-0.2
4,222,311	-				+1.8
4,222,311	-				-0.5
4,222,325	-				-0.3
4,222,354	-				+0.5
4,222,354	-				-0.8
4,222,357	+				-1.0
4,222,357	+				-0.2
4,222,357	+				-1.1
4,222,357	+				+0.1
4,222,358	-				-0.2
4,222,358	-				+0.8
4,222,358	-				+1.5
4,222,358	-				+1.3
4,222,358	-				-0.0
4,222,358	-				+0.8
4,222,358	-				-0.3
4,222,358	-				+0.2
4,222,358	-				-0.2
4,222,358	-				+1.2
4,222,358	-				-1.2
4,222,358	-				-0.2
4,222,358	-				+0.6
4,222,370	+				-0.2
4,222,403	-				-0.2
4,222,440	-				+0.8
4,222,447	-				-0.6
4,222,447	-				+0.3
4,222,556	-				-0.8
4,222,556	-				-0.9
4,222,556	-				+3.1
4,222,556	-				-2.2
4,222,556	-				+0.1
4,222,590	-				-0.2
4,222,590	-		Pf1N1B4_3811	0.10	-1.1
4,222,651	+		Pf1N1B4_3811	0.27	-1.2
4,222,652	-		Pf1N1B4_3811	0.27	-0.2
4,222,652	-		Pf1N1B4_3811	0.27	-1.2
4,222,652	-		Pf1N1B4_3811	0.27	-1.4
4,222,965	+				-0.2
4,222,967	+				-0.2
4,222,967	+				-2.2
4,222,967	+				-0.8
4,222,967	+				+0.1
4,222,967	+				-2.0
4,222,967	+				-2.2
4,222,967	+				-0.8
4,222,967	+				-0.1
4,222,967	+				-0.8
4,222,967	+				-0.2
4,222,968	-				-0.1
4,222,978	+				-1.9
4,222,978	+				-1.2
4,222,978	+				+0.1
4,222,978	+				-1.8
4,222,979	-				-1.9
4,222,979	-				-0.2
4,222,991	+				+0.4
4,223,156	+		Pf1N1B4_3812	0.22	-3.3
4,223,156	+		Pf1N1B4_3812	0.22	+0.8
4,223,156	+		Pf1N1B4_3812	0.22	-1.2
4,223,157	-		Pf1N1B4_3812	0.23	-2.4
4,223,157	-		Pf1N1B4_3812	0.23	-2.8
4,223,157	-		Pf1N1B4_3812	0.23	-1.2
4,223,180	+		Pf1N1B4_3812	0.26	-1.5
4,223,180	+		Pf1N1B4_3812	0.26	-1.2
4,223,181	-		Pf1N1B4_3812	0.26	-2.1
4,223,229	-		Pf1N1B4_3812	0.32	-0.2
4,223,229	-		Pf1N1B4_3812	0.32	-2.7
4,223,405	+		Pf1N1B4_3812	0.56	-0.7
4,223,405	+		Pf1N1B4_3812	0.56	-1.1
4,223,405	+		Pf1N1B4_3812	0.56	-1.5
4,223,405	+		Pf1N1B4_3812	0.56	-0.3
4,223,405	+		Pf1N1B4_3812	0.56	-1.8
4,223,405	+		Pf1N1B4_3812	0.56	-1.5
4,223,406	-		Pf1N1B4_3812	0.56	-1.4
4,223,406	-		Pf1N1B4_3812	0.56	-2.7
4,223,406	-		Pf1N1B4_3812	0.56	-1.4
4,223,453	+		Pf1N1B4_3812	0.62	-1.0
4,223,454	-		Pf1N1B4_3812	0.63	-2.2
4,223,454	-		Pf1N1B4_3812	0.63	-1.8
4,223,454	-				+1.4
4,223,486	+		Pf1N1B4_3812	0.67	-0.0
4,223,486	+		Pf1N1B4_3812	0.67	-1.0
4,223,486	+		Pf1N1B4_3812	0.67	-1.0
4,223,486	+		Pf1N1B4_3812	0.67	+0.1
4,223,486	+		Pf1N1B4_3812	0.67	-1.5
4,223,486	+		Pf1N1B4_3812	0.67	-1.8
4,223,486	+		Pf1N1B4_3812	0.67	-1.8
4,223,487	-		Pf1N1B4_3812	0.67	-0.5
4,223,487	-		Pf1N1B4_3812	0.67	-1.5
4,223,487	-		Pf1N1B4_3812	0.67	-3.0
4,223,487	-		Pf1N1B4_3812	0.67	-1.8
4,223,487	-		Pf1N1B4_3812	0.67	-2.5
4,223,487	-		Pf1N1B4_3812	0.67	-2.0
4,223,487	-		Pf1N1B4_3812	0.67	-2.4
4,223,487	-		Pf1N1B4_3812	0.67	-0.4
4,223,487	-		Pf1N1B4_3812	0.67	-2.8
4,223,487	-		Pf1N1B4_3812	0.67	-2.2
4,223,487	-		Pf1N1B4_3812	0.67	-0.2
4,223,516	+		Pf1N1B4_3812	0.71	+0.4
4,223,516	+		Pf1N1B4_3812	0.71	-0.7
4,223,517	-		Pf1N1B4_3812	0.71	-1.8
4,223,517	-		Pf1N1B4_3812	0.71	-3.4
4,223,623	+		Pf1N1B4_3812	0.85	+0.2
4,223,690	+				-1.9
4,223,690	+				-1.2
4,223,690	+				-3.8
4,223,690	+				-1.6
4,223,690	+				-1.1
4,223,690	+				-1.0
4,223,690	+				-1.4
4,223,690	+				-1.9
4,223,690	+				-1.7
4,223,690	+				-1.5
4,223,691	-				+0.6
4,223,691	-				-1.5
4,223,691	-				-0.8
4,223,691	-				-0.8
4,223,691	-				-0.4
4,223,691	-				-1.9
4,223,744	+				-1.8
4,223,744	+				-0.6
4,223,769	+				-1.0
4,223,769	+				+0.5
4,223,769	+				+0.2
4,223,769	+				-2.2
4,223,769	+				-0.9
4,223,769	+				-3.1
4,223,769	+				-0.7
4,223,769	+				-0.0
4,223,769	+				-2.2
4,223,769	+				-0.4
4,223,769	+				-1.9
4,223,769	+				-1.1
4,223,769	+				-0.7
4,223,769	+				-1.3
4,223,769	+				-0.7
4,223,769	+				-0.5
4,223,769	+				-0.8
4,223,770	-				+0.8
4,223,770	-				+0.5
4,223,770	-				-1.0
4,223,770	-				-1.2
4,223,770	-				+0.6
4,223,770	-				-0.2
4,223,770	-				+0.8
4,223,771	+				-2.5
4,223,771	+				-2.5
4,223,771	+				-2.7
4,223,771	+				-1.6
4,223,771	+				-1.8
4,223,771	+				-1.2
4,223,771	+				-1.4
4,223,771	+				-1.6
4,223,771	+				+0.2
4,223,771	+				-2.9
4,223,771	+				-1.7
4,223,771	+				-1.5
4,223,771	+				-0.9
4,223,771	+				-0.7
4,223,771	+				-1.4
4,223,771	+				-0.1
4,223,771	+				-0.8
4,223,771	+				-1.0
4,223,771	+				-2.0
4,223,771	+				-0.3
4,223,771	+				-1.8
4,223,771	+				-1.9
4,223,771	+				-2.4
4,223,771	+				-3.0
4,223,771	+				-1.7
4,223,771	+				-1.0
4,223,771	+				-1.8
4,223,771	+				-0.2
4,223,771	+				+0.8
4,223,771	+				+0.2
4,223,771	+				-0.8
4,223,771	+				-0.4
4,223,771	+				-1.3
4,223,771	+				-0.2
4,223,771	+				-1.4
4,223,771	+				-0.6
4,223,771	+				-0.0
4,223,772	-				-1.2
4,223,772	-				-2.2
4,223,772	-				-0.2
4,223,772	-				-0.4
4,223,772	-				-0.5
4,223,772	-				+1.4
4,223,772	-				+0.8
4,223,772	-				-0.3
4,223,772	-				-2.7
4,223,772	-				+0.4
4,223,772	-				-2.4
4,223,772	-				+0.8