Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2841

Experiment: Chloride 300 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloride 300 mM
3,184,395	-				-0.2
3,184,423	-				-0.8
3,184,423	-				-0.8
3,184,423	-				-0.0
3,184,423	-				+0.2
3,184,423	-				+0.3
3,184,434	-				+0.8
3,184,434	-				-0.4
3,184,480	-				+0.2
3,184,673	+		Pf1N1B4_2840	0.32	-0.4
3,185,001	+		Pf1N1B4_2840	0.69	+0.2
3,185,001	+		Pf1N1B4_2840	0.69	-0.8
3,185,002	-				+1.2
3,185,002	-		Pf1N1B4_2840	0.69	-1.6
3,185,002	-		Pf1N1B4_2840	0.69	+1.3
3,185,002	-		Pf1N1B4_2840	0.69	+1.2
3,185,002	-		Pf1N1B4_2840	0.69	+0.5
3,185,073	-		Pf1N1B4_2840	0.77	+1.2
3,185,082	+		Pf1N1B4_2840	0.78	+0.6
3,185,082	+		Pf1N1B4_2840	0.78	+0.3
3,185,082	+		Pf1N1B4_2840	0.78	-0.4
3,185,083	-		Pf1N1B4_2840	0.79	-0.4
3,185,083	-		Pf1N1B4_2840	0.79	+0.4
3,185,083	-		Pf1N1B4_2840	0.79	+0.2
3,185,083	-		Pf1N1B4_2840	0.79	-1.3
3,185,083	-		Pf1N1B4_2840	0.79	+0.2
3,185,269	+				+0.8
3,185,269	+				-0.4
3,185,270	-				-0.4
3,185,270	-				-1.0
3,185,270	-				-1.4
3,185,270	-				-1.7
3,185,270	-				+0.8
3,185,270	-				-2.6
3,185,305	+				-1.2
3,185,305	+				-1.4
3,185,306	-				-1.8
3,185,343	+				-0.0
3,185,344	-				-0.8
3,185,346	+				-0.6
3,185,346	+				+0.7
3,185,347	-				+0.2
3,185,347	-				-0.4
3,185,410	+		Pf1N1B4_2841	0.11	-1.0
3,185,410	+		Pf1N1B4_2841	0.11	+0.5
3,185,411	-		Pf1N1B4_2841	0.11	+0.2
3,185,411	-		Pf1N1B4_2841	0.11	-0.1
3,185,496	+		Pf1N1B4_2841	0.18	-1.2
3,185,496	+		Pf1N1B4_2841	0.18	-0.6
3,185,496	+				-0.8
3,185,496	+		Pf1N1B4_2841	0.18	+0.2
3,185,497	-		Pf1N1B4_2841	0.19	+0.4
3,185,497	-		Pf1N1B4_2841	0.19	-1.9
3,185,497	-		Pf1N1B4_2841	0.19	-1.2
3,185,497	-		Pf1N1B4_2841	0.19	-1.2
3,185,497	-		Pf1N1B4_2841	0.19	-0.4
3,185,497	-		Pf1N1B4_2841	0.19	+1.3
3,185,498	+		Pf1N1B4_2841	0.19	-0.1
3,185,498	+		Pf1N1B4_2841	0.19	-0.8
3,185,553	+		Pf1N1B4_2841	0.23	-1.2
3,185,553	+		Pf1N1B4_2841	0.23	+0.5
3,185,559	+		Pf1N1B4_2841	0.24	-0.3
3,185,559	+		Pf1N1B4_2841	0.24	+0.8
3,185,559	+		Pf1N1B4_2841	0.24	+0.3
3,185,559	+				+2.8
3,185,562	+		Pf1N1B4_2841	0.24	+2.8
3,185,562	+		Pf1N1B4_2841	0.24	+1.2
3,185,563	-		Pf1N1B4_2841	0.24	+0.2
3,185,686	+		Pf1N1B4_2841	0.34	+2.0
3,185,686	+		Pf1N1B4_2841	0.34	+0.2
3,185,687	-		Pf1N1B4_2841	0.34	-0.7
3,185,687	-				+1.2
3,185,687	-		Pf1N1B4_2841	0.34	+1.5
3,185,971	+		Pf1N1B4_2841	0.57	+0.2
3,185,971	+		Pf1N1B4_2841	0.57	+1.7
3,185,972	-		Pf1N1B4_2841	0.58	-2.4
3,186,022	+		Pf1N1B4_2841	0.62	+0.8
3,186,022	+		Pf1N1B4_2841	0.62	-0.1
3,186,022	+		Pf1N1B4_2841	0.62	+0.5
3,186,022	+		Pf1N1B4_2841	0.62	-0.5
3,186,023	-		Pf1N1B4_2841	0.62	+1.2
3,186,023	-		Pf1N1B4_2841	0.62	-1.2
3,186,023	-		Pf1N1B4_2841	0.62	+0.7
3,186,023	-		Pf1N1B4_2841	0.62	+0.6
3,186,023	-		Pf1N1B4_2841	0.62	+0.5
3,186,091	+		Pf1N1B4_2841	0.67	-0.4
3,186,091	+		Pf1N1B4_2841	0.67	-0.4
3,186,091	+		Pf1N1B4_2841	0.67	+1.3
3,186,091	+				+2.8
3,186,091	+		Pf1N1B4_2841	0.67	-2.0
3,186,106	+		Pf1N1B4_2841	0.69	-0.4
3,186,106	+		Pf1N1B4_2841	0.69	+0.4
3,186,107	-		Pf1N1B4_2841	0.69	-0.5
3,186,107	-		Pf1N1B4_2841	0.69	-0.4
3,186,166	-		Pf1N1B4_2841	0.73	+0.5
3,186,240	+		Pf1N1B4_2841	0.80	-0.2
3,186,324	-		Pf1N1B4_2841	0.86	+1.4
3,186,372	+				-1.4
3,186,457	+				-0.5
3,186,457	+				+0.8
3,186,457	+				-0.3
3,186,457	+				-1.2
3,186,458	-				-0.1
3,186,458	-				-0.2
3,186,458	-				-1.4
3,186,458	-				+1.2
3,186,458	-				-0.8
3,186,458	-				-0.6
3,186,459	+				-1.6
3,186,459	+				-0.6
3,186,459	+				+0.2
3,186,459	+				+0.6
3,186,459	+				+0.2
3,186,459	+				+1.2
3,186,459	+				-0.8
3,186,459	+				-2.0
3,186,459	+				+0.5
3,186,459	+				+0.6
3,186,460	-				+0.6
3,186,460	-				-0.0
3,186,460	-				+1.8
3,186,460	-				-1.2
3,186,460	-				-0.1
3,186,460	-				+0.3
3,186,460	-				-1.2
3,186,562	+				-0.1
3,186,660	-				-1.2
3,186,669	+		Pf1N1B4_2842	0.10	+1.2
3,186,669	+		Pf1N1B4_2842	0.10	-0.1
3,186,669	+		Pf1N1B4_2842	0.10	-0.4
3,186,669	+		Pf1N1B4_2842	0.10	-1.1
3,186,669	+		Pf1N1B4_2842	0.10	-0.1
3,186,670	-		Pf1N1B4_2842	0.11	-0.5
3,186,670	-		Pf1N1B4_2842	0.11	-2.2
3,186,670	-		Pf1N1B4_2842	0.11	-0.5
3,186,690	+		Pf1N1B4_2842	0.12	+0.2
3,186,690	+		Pf1N1B4_2842	0.12	+3.2
3,186,690	+		Pf1N1B4_2842	0.12	-2.0
3,186,726	+		Pf1N1B4_2842	0.14	-1.8
3,186,726	+		Pf1N1B4_2842	0.14	-0.1
3,186,726	+		Pf1N1B4_2842	0.14	+1.2
3,186,726	+		Pf1N1B4_2842	0.14	+0.8
3,186,726	+		Pf1N1B4_2842	0.14	+1.2
3,186,726	+		Pf1N1B4_2842	0.14	+0.2
3,186,726	+		Pf1N1B4_2842	0.14	+3.5
3,186,726	+		Pf1N1B4_2842	0.14	+0.8
3,186,726	+		Pf1N1B4_2842	0.14	-1.2
3,186,727	-		Pf1N1B4_2842	0.14	+0.4
3,186,727	-				-1.2
3,186,727	-		Pf1N1B4_2842	0.14	+1.2
3,186,727	-		Pf1N1B4_2842	0.14	-0.8
3,186,727	-		Pf1N1B4_2842	0.14	+0.3
3,186,727	-		Pf1N1B4_2842	0.14	-0.4
3,187,144	+		Pf1N1B4_2842	0.38	+0.2
3,187,144	+		Pf1N1B4_2842	0.38	-1.7
3,187,144	+		Pf1N1B4_2842	0.38	+0.8
3,187,144	+		Pf1N1B4_2842	0.38	-0.8
3,187,145	-		Pf1N1B4_2842	0.38	-0.6
3,187,182	+		Pf1N1B4_2842	0.41	-0.6
3,187,183	-				+0.6
3,187,183	-				+1.2
3,187,183	-		Pf1N1B4_2842	0.41	+0.2
3,187,183	-		Pf1N1B4_2842	0.41	-1.4
3,187,260	+		Pf1N1B4_2842	0.45	+0.8
3,187,260	+		Pf1N1B4_2842	0.45	+0.4
3,187,260	+		Pf1N1B4_2842	0.45	+1.6
3,187,260	+		Pf1N1B4_2842	0.45	-0.5
3,187,260	+		Pf1N1B4_2842	0.45	-1.6
3,187,260	+				-1.4
3,187,260	+		Pf1N1B4_2842	0.45	+1.2
3,187,260	+		Pf1N1B4_2842	0.45	+1.2
3,187,260	+		Pf1N1B4_2842	0.45	+0.0
3,187,261	-		Pf1N1B4_2842	0.45	-1.6
3,187,261	-		Pf1N1B4_2842	0.45	-0.3
3,187,261	-		Pf1N1B4_2842	0.45	+0.4
3,187,261	-		Pf1N1B4_2842	0.45	+0.6
3,187,261	-		Pf1N1B4_2842	0.45	-0.6
3,187,261	-		Pf1N1B4_2842	0.45	-0.0
3,187,261	-		Pf1N1B4_2842	0.45	-0.1
3,187,261	-		Pf1N1B4_2842	0.45	-0.3
3,187,261	-		Pf1N1B4_2842	0.45	-0.3
3,187,261	-		Pf1N1B4_2842	0.45	+0.2
3,187,261	-		Pf1N1B4_2842	0.45	-0.4
3,187,334	+		Pf1N1B4_2842	0.50	-1.2
3,187,334	+		Pf1N1B4_2842	0.50	-0.7
3,187,334	+		Pf1N1B4_2842	0.50	+0.2
3,187,334	+				+1.2
3,187,334	+		Pf1N1B4_2842	0.50	-0.8
3,187,337	+		Pf1N1B4_2842	0.50	-0.2
3,187,338	-		Pf1N1B4_2842	0.50	-0.8