Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03897

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
2,320,707	-		CCNA_02166	0.66	+0.7
2,320,730	+		CCNA_02166	0.70	-0.8
2,320,738	-		CCNA_02166	0.71	-1.8
2,320,752	+		CCNA_02166	0.74	-1.2
2,320,760	-		CCNA_02166	0.75	-1.3
2,320,811	+		CCNA_02166	0.84	-0.0
2,320,830	+		CCNA_02166	0.87	-2.5
2,320,917	+				-0.0
2,320,919	-				-1.0
2,320,955	-				-0.5
2,321,000	-				-0.9
2,321,003	+				-1.0
2,321,011	-				-1.6
2,321,011	-				-0.2
2,321,019	+		CCNA_02167	0.11	-1.3
2,321,025	+		CCNA_02167	0.12	-0.3
2,321,025	+		CCNA_02167	0.12	-0.4
2,321,026	-		CCNA_02167	0.12	-1.9
2,321,027	-		CCNA_02167	0.12	-1.4
2,321,027	-		CCNA_02167	0.12	+0.2
2,321,027	-		CCNA_02167	0.12	-0.9
2,321,033	-		CCNA_02167	0.13	+0.5
2,321,073	-		CCNA_02167	0.20	+0.5
2,321,107	+		CCNA_02167	0.25	-0.5
2,321,107	+		CCNA_02167	0.25	+0.0
2,321,115	-		CCNA_02167	0.26	-0.4
2,321,143	+		CCNA_02167	0.31	+0.1
2,321,157	+		CCNA_02167	0.33	-1.1
2,321,163	-		CCNA_02167	0.34	-0.6
2,321,165	-		CCNA_02167	0.34	-2.4
2,321,245	+		CCNA_02167	0.47	-0.9
2,321,302	+		CCNA_02167	0.56	-2.0
2,321,340	+		CCNA_02167	0.62	+1.0
2,321,356	+		CCNA_02167	0.64	+1.1
2,321,364	-		CCNA_02167	0.66	-0.0
2,321,364	-		CCNA_02167	0.66	+1.8
2,321,369	-		CCNA_02167	0.66	+1.2
2,321,369	-		CCNA_02167	0.66	+0.1
2,321,399	+		CCNA_02167	0.71	+0.0
2,321,456	-		CCNA_02167	0.80	+0.5
2,321,482	-		CCNA_02167	0.84	+0.8
2,321,483	-		CCNA_02167	0.84	-1.2
2,321,487	-		CCNA_02167	0.85	-1.7
2,321,493	+		CCNA_02167	0.86	+0.2
2,321,494	+		CCNA_02167	0.86	-0.3
2,321,494	+		CCNA_02167	0.86	-0.6
2,321,494	+		CCNA_02167	0.86	+0.5
2,321,501	-		CCNA_02167	0.87	+0.1
2,321,501	-		CCNA_02167	0.87	-2.7
2,321,501	-		CCNA_02167	0.87	+0.6
2,321,502	-		CCNA_02167	0.87	-2.2
2,321,509	-		CCNA_02167	0.88	-1.8
2,321,531	+				-1.5
2,321,533	-				+0.3
2,321,539	-				-0.7
2,321,606	+				-2.0
2,321,606	+				-0.4
2,321,606	+				-0.4
2,321,613	-				+1.2
2,321,613	-				-0.3
2,321,614	-				+0.5
2,321,614	-				+0.5
2,321,614	-				-0.5
2,321,665	-				+1.1
2,321,678	+				-1.2
2,321,686	-		CCNA_03897	0.11	-0.3
2,321,808	+		CCNA_03897	0.53	-0.3
2,321,828	-		CCNA_03897	0.60	+0.8
2,321,853	-		CCNA_03897	0.69	-1.6
2,321,887	+		CCNA_03897	0.81	-2.0
2,321,895	-		CCNA_03897	0.83	-2.7
2,321,918	-				+1.2
2,321,918	-				+0.1
2,321,922	+				-0.0
2,321,923	-				-0.4
2,321,927	-				-0.1
2,321,938	+				+0.5
2,321,946	-				-0.9
2,321,994	+				+0.9
2,322,014	-				-0.3
2,322,073	+				-0.4
2,322,073	+				-1.4
2,322,091	-		CCNA_02169	0.10	-0.0
2,322,091	-		CCNA_02169	0.10	-2.6
2,322,091	-		CCNA_02169	0.10	-0.9
2,322,171	+		CCNA_02169	0.28	-1.8
2,322,252	+		CCNA_02169	0.46	+1.7
2,322,295	-		CCNA_02169	0.55	+2.0
2,322,308	+		CCNA_02169	0.58	-0.2
2,322,316	+		CCNA_02169	0.60	+0.5
2,322,318	+		CCNA_02169	0.60	-1.1
2,322,348	+		CCNA_02169	0.67	-0.8
2,322,398	+		CCNA_02169	0.78	-0.5
2,322,435	-		CCNA_02169	0.86	-1.3
2,322,439	-		CCNA_02169	0.87	-0.9
2,322,442	+		CCNA_02169	0.88	-1.6
2,322,442	+		CCNA_02169	0.88	-0.1
2,322,450	-		CCNA_02169	0.89	-1.5
2,322,450	-		CCNA_02169	0.89	-1.2
2,322,453	+				-2.9
2,322,453	+				-0.5
2,322,471	-				-0.9
2,322,481	-				-1.3
2,322,524	+				-2.4
2,322,571	+				-1.5
2,322,579	-				-0.6
2,322,579	-				-2.8
2,322,579	-				+0.2
2,322,579	-				-1.2
2,322,581	+				-0.4
2,322,581	+				+1.2
2,322,581	+				-1.3
2,322,581	+				+1.4
2,322,581	+				-1.5
2,322,581	+				-0.4
2,322,583	-				-0.8
2,322,589	-				+0.4
2,322,589	-				-0.5
2,322,589	-				+0.1
2,322,589	-				-0.6
2,322,589	-				-1.0
2,322,589	-				-1.3
2,322,589	-				-0.9
2,322,589	-				-0.4
2,322,589	-				+0.2
2,322,611	+				-0.3
2,322,619	-				+1.0
2,322,620	+				-0.2
2,322,683	-		CCNA_02170	0.11	-2.5
2,322,698	-		CCNA_02170	0.13	-1.4
2,322,808	+		CCNA_02170	0.31	-1.6
2,322,808	+		CCNA_02170	0.31	-1.7
2,322,816	-		CCNA_02170	0.32	-0.9
2,322,816	-		CCNA_02170	0.32	-1.8
2,322,816	-		CCNA_02170	0.32	-0.5
2,322,816	-		CCNA_02170	0.32	+1.5
2,322,895	+		CCNA_02170	0.45	+0.5