Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02945

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,103,691	+				+0.5
3,103,696	+				+0.5
3,103,698	+				-0.2
3,103,722	+				+0.6
3,103,730	-				-1.4
3,103,739	-				+0.2
3,103,750	+		CCNA_03982	0.18	-2.4
3,103,750	+		CCNA_03982	0.18	+0.8
3,103,879	+				-0.2
3,103,896	+				-1.4
3,103,896	+				+1.2
3,103,898	+				+0.6
3,103,960	+				-0.2
3,103,963	-				+2.5
3,103,968	-				-0.8
3,104,010	+				-0.4
3,104,010	+				-0.8
3,104,010	+				+0.4
3,104,010	+				+0.8
3,104,010	+				+0.9
3,104,010	+				+0.5
3,104,010	+				-0.6
3,104,010	+				-1.1
3,104,015	+				-0.4
3,104,018	-				-0.5
3,104,018	-				-0.8
3,104,018	-				-0.9
3,104,018	-				+0.6
3,104,018	-				+2.2
3,104,018	-				-1.3
3,104,018	-				-0.8
3,104,018	-				+0.3
3,104,027	+		CCNA_02944	0.10	+1.3
3,104,027	+		CCNA_02944	0.10	+1.0
3,104,035	-		CCNA_02944	0.11	-1.3
3,104,079	+		CCNA_02944	0.17	+0.1
3,104,126	+		CCNA_02944	0.24	-1.0
3,104,129	-		CCNA_02944	0.24	+0.0
3,104,134	-		CCNA_02944	0.25	-1.3
3,104,146	-		CCNA_02944	0.26	-0.6
3,104,189	-		CCNA_02944	0.32	-1.8
3,104,251	+		CCNA_02944	0.41	+0.6
3,104,319	+		CCNA_02944	0.50	-0.8
3,104,479	-		CCNA_02944	0.71	+3.5
3,104,485	+		CCNA_02944	0.72	+0.9
3,104,568	+		CCNA_02944	0.83	+0.4
3,104,575	+		CCNA_02944	0.84	+0.7
3,104,589	+		CCNA_02944	0.86	+0.4
3,104,630	-				+0.8
3,104,656	+				+0.5
3,104,684	+				+1.5
3,104,684	+				+1.5
3,104,692	-				-0.9
3,104,692	-				+1.8
3,104,765	-				-1.3
3,104,768	+				-0.8
3,104,768	+				-0.3
3,104,768	+				+1.6
3,104,768	+				-2.2
3,104,768	+				+0.5
3,104,768	+				+0.8
3,104,768	+				-1.3
3,104,768	+				+1.0
3,104,768	+				+0.1
3,104,771	-				+2.3
3,104,776	-				+1.5
3,104,776	-				+1.3
3,104,776	-				-0.2
3,104,803	+				+1.7
3,104,809	-				-1.1
3,104,811	+				-0.2
3,104,811	-				-1.8
3,104,817	+				+1.4
3,104,834	+				-1.2
3,104,858	+				-0.0
3,104,917	+		CCNA_02945	0.12	-0.5
3,104,922	-		CCNA_02945	0.12	-1.0
3,104,922	-		CCNA_02945	0.12	+0.8
3,104,927	+		CCNA_02945	0.12	-0.3
3,104,938	+		CCNA_02945	0.13	-0.9
3,104,938	+		CCNA_02945	0.13	+0.2
3,104,940	+		CCNA_02945	0.13	-1.0
3,105,016	+		CCNA_02945	0.17	-0.0
3,105,031	+		CCNA_02945	0.18	+0.7
3,105,080	+		CCNA_02945	0.20	-0.0
3,105,125	+		CCNA_02945	0.22	-1.7
3,105,128	-		CCNA_02945	0.22	+0.6
3,105,146	-		CCNA_02945	0.23	-0.2
3,105,146	-		CCNA_02945	0.23	-0.0
3,105,158	+		CCNA_02945	0.24	-0.1
3,105,219	+		CCNA_02945	0.27	-1.1
3,105,227	-		CCNA_02945	0.28	-0.7
3,105,287	-		CCNA_02945	0.31	-1.5
3,105,297	-		CCNA_02945	0.31	-2.1
3,105,323	-		CCNA_02945	0.32	+2.1
3,105,323	-		CCNA_02945	0.32	+2.5
3,105,325	+		CCNA_02945	0.33	-2.0
3,105,333	-		CCNA_02945	0.33	-1.2
3,105,334	-		CCNA_02945	0.33	-0.3
3,105,344	+		CCNA_02945	0.33	-1.5
3,105,352	-		CCNA_02945	0.34	-0.1
3,105,352	-		CCNA_02945	0.34	-0.5
3,105,352	-		CCNA_02945	0.34	-0.0
3,105,400	-		CCNA_02945	0.36	-0.5
3,105,423	+		CCNA_02945	0.38	-2.1
3,105,423	+		CCNA_02945	0.38	-0.0
3,105,424	-		CCNA_02945	0.38	-0.3
3,105,454	-		CCNA_02945	0.39	-1.8
3,105,454	-		CCNA_02945	0.39	-2.5
3,105,463	-		CCNA_02945	0.40	-0.4
3,105,480	-		CCNA_02945	0.40	+0.5
3,105,485	+		CCNA_02945	0.41	-0.1
3,105,485	+		CCNA_02945	0.41	+0.5
3,105,490	+		CCNA_02945	0.41	-1.4
3,105,490	+		CCNA_02945	0.41	-0.8
3,105,490	+		CCNA_02945	0.41	-0.8
3,105,493	-		CCNA_02945	0.41	-2.0
3,105,505	-		CCNA_02945	0.42	-1.0
3,105,526	-		CCNA_02945	0.43	-1.1
3,105,555	+		CCNA_02945	0.44	-0.6
3,105,555	+		CCNA_02945	0.44	-0.0
3,105,555	+		CCNA_02945	0.44	-0.6
3,105,555	+		CCNA_02945	0.44	+1.8
3,105,555	+		CCNA_02945	0.44	+0.1
3,105,555	+		CCNA_02945	0.44	+1.9
3,105,555	+		CCNA_02945	0.44	+0.4
3,105,555	+		CCNA_02945	0.44	-0.5
3,105,563	-		CCNA_02945	0.45	-1.2
3,105,563	-		CCNA_02945	0.45	+2.9
3,105,595	+		CCNA_02945	0.46	+0.5
3,105,603	-		CCNA_02945	0.47	-0.2
3,105,603	-		CCNA_02945	0.47	+0.5
3,105,616	+		CCNA_02945	0.47	-0.3
3,105,616	+		CCNA_02945	0.47	-1.6
3,105,624	-		CCNA_02945	0.48	+0.7
3,105,624	-		CCNA_02945	0.48	-0.6
3,105,636	+		CCNA_02945	0.48	+0.6
3,105,636	+		CCNA_02945	0.48	+1.0
3,105,636	+		CCNA_02945	0.48	-1.1
3,105,636	+		CCNA_02945	0.48	-0.6
3,105,644	-		CCNA_02945	0.49	-0.9
3,105,644	-		CCNA_02945	0.49	-0.4
3,105,644	-		CCNA_02945	0.49	+0.3
3,105,646	+		CCNA_02945	0.49	-0.5
3,105,654	-		CCNA_02945	0.49	-0.7
3,105,654	-		CCNA_02945	0.49	+0.3
3,105,654	-		CCNA_02945	0.49	-0.0
3,105,662	+		CCNA_02945	0.50	+0.9
3,105,725	+		CCNA_02945	0.53	-1.0
3,105,725	+		CCNA_02945	0.53	+2.1
3,105,725	+		CCNA_02945	0.53	-0.2
3,105,725	+		CCNA_02945	0.53	-0.2
3,105,725	+		CCNA_02945	0.53	+1.6
3,105,733	-		CCNA_02945	0.53	-0.6
3,105,733	-		CCNA_02945	0.53	-1.0
3,105,733	-		CCNA_02945	0.53	+1.0
3,105,733	-		CCNA_02945	0.53	-1.2
3,105,733	-		CCNA_02945	0.53	+2.5
3,105,733	-		CCNA_02945	0.53	-1.6
3,105,733	-		CCNA_02945	0.53	-0.4
3,105,733	-		CCNA_02945	0.53	-0.8
3,105,740	+		CCNA_02945	0.54	-0.4
3,105,770	+		CCNA_02945	0.55	-1.4
3,105,770	+		CCNA_02945	0.55	-1.2
3,105,770	+		CCNA_02945	0.55	-1.1
3,105,770	+		CCNA_02945	0.55	-1.0
3,105,770	+		CCNA_02945	0.55	-1.3
3,105,770	+		CCNA_02945	0.55	-0.2
3,105,770	+				+1.8
3,105,770	+		CCNA_02945	0.55	+0.4
3,105,770	+		CCNA_02945	0.55	-0.8
3,105,770	+		CCNA_02945	0.55	-0.4
3,105,770	+		CCNA_02945	0.55	+0.9
3,105,770	+		CCNA_02945	0.55	-1.0
3,105,770	+		CCNA_02945	0.55	-0.9
3,105,770	+		CCNA_02945	0.55	-0.7
3,105,770	+		CCNA_02945	0.55	-2.2
3,105,770	+		CCNA_02945	0.55	+1.3
3,105,770	+		CCNA_02945	0.55	-0.5
3,105,770	+		CCNA_02945	0.55	-1.0
3,105,770	+				+2.1
3,105,770	+		CCNA_02945	0.55	-1.0
3,105,770	+		CCNA_02945	0.55	+0.5
3,105,778	-		CCNA_02945	0.56	+0.8
3,105,778	-		CCNA_02945	0.56	+1.3
3,105,778	-		CCNA_02945	0.56	+0.9
3,105,778	-		CCNA_02945	0.56	-0.2
3,105,778	-		CCNA_02945	0.56	+0.5
3,105,778	-		CCNA_02945	0.56	-1.6
3,105,778	-		CCNA_02945	0.56	-0.8
3,105,778	-		CCNA_02945	0.56	-0.6
3,105,778	-		CCNA_02945	0.56	+0.2
3,105,778	-		CCNA_02945	0.56	-0.5
3,105,802	-		CCNA_02945	0.57	+1.8
3,105,843	-		CCNA_02945	0.59	-1.4
3,105,852	+		CCNA_02945	0.59	-0.4
3,105,859	-		CCNA_02945	0.60	+0.8
3,105,860	-		CCNA_02945	0.60	-1.6
3,105,860	-		CCNA_02945	0.60	-0.7
3,105,860	-		CCNA_02945	0.60	-0.7
3,105,860	-		CCNA_02945	0.60	-1.4
3,105,975	+		CCNA_02945	0.66	-0.2
3,105,981	+		CCNA_02945	0.66	-0.8
3,106,031	-		CCNA_02945	0.69	+0.9
3,106,100	-		CCNA_02945	0.72	+0.8
3,106,202	+		CCNA_02945	0.77	-0.3
3,106,210	-		CCNA_02945	0.78	-2.4
3,106,219	+		CCNA_02945	0.78	+0.6
3,106,241	+		CCNA_02945	0.79	-2.5
3,106,241	+		CCNA_02945	0.79	-0.2
3,106,249	-		CCNA_02945	0.80	+0.2
3,106,249	-		CCNA_02945	0.80	+1.1
3,106,284	+		CCNA_02945	0.81	+1.1
3,106,291	-		CCNA_02945	0.82	+1.8
3,106,309	+		CCNA_02945	0.83	+0.6
3,106,395	-		CCNA_02945	0.87	+1.4
3,106,424	-		CCNA_02945	0.89	+0.6
3,106,424	-		CCNA_02945	0.89	+0.1
3,106,520	+				-0.7
3,106,562	-				-0.3
3,106,572	-				+1.7
3,106,572	-				-0.7
3,106,592	-				+0.7
3,106,617	+				-0.7
3,106,641	-				-0.5
3,106,652	+				-0.8
3,106,654	+				+1.8
3,106,660	-				-1.0
3,106,670	-				-0.2
3,106,693	+				-1.6
3,106,702	-				-0.2
3,106,710	-				+0.3
3,106,787	+				-1.9
3,106,801	+				+2.7
3,106,820	+				+0.9
3,106,828	-				-0.1
3,106,828	-				-0.1
3,106,828	-				+0.9
3,106,860	+				-0.7
3,106,901	+				+1.3
3,106,911	+				+1.5
3,106,922	+		CCNA_02946	0.11	+0.1
3,106,957	+		CCNA_02946	0.16	-0.1
3,106,957	+		CCNA_02946	0.16	+1.7
3,106,965	-		CCNA_02946	0.17	+0.2
3,106,977	-		CCNA_02946	0.18	+0.4
3,107,009	-		CCNA_02946	0.23	-0.3
3,107,049	+		CCNA_02946	0.28	-1.9
3,107,051	+		CCNA_02946	0.29	-0.2
3,107,071	+		CCNA_02946	0.32	+2.4
3,107,071	+		CCNA_02946	0.32	+2.1
3,107,081	-		CCNA_02946	0.33	-0.3
3,107,168	-		CCNA_02946	0.45	-0.6
3,107,182	+		CCNA_02946	0.47	-0.6
3,107,184	-		CCNA_02946	0.47	-2.1
3,107,190	-		CCNA_02946	0.48	-1.5
3,107,229	+		CCNA_02946	0.54	-0.7
3,107,237	-		CCNA_02946	0.55	-0.2
3,107,240	+		CCNA_02946	0.55	-0.3
3,107,240	+		CCNA_02946	0.55	-0.3
3,107,240	+		CCNA_02946	0.55	+0.7
3,107,240	+		CCNA_02946	0.55	+2.2
3,107,277	+		CCNA_02946	0.60	-1.1
3,107,280	-		CCNA_02946	0.61	+0.5
3,107,285	-		CCNA_02946	0.61	-1.4
3,107,285	-		CCNA_02946	0.61	-0.1
3,107,285	-		CCNA_02946	0.61	-0.5
3,107,285	-		CCNA_02946	0.61	-0.9
3,107,285	-		CCNA_02946	0.61	-0.7
3,107,293	+		CCNA_02946	0.62	-0.5
3,107,340	-		CCNA_02946	0.69	+1.3
3,107,345	+		CCNA_02946	0.70	-1.1
3,107,357	+		CCNA_02946	0.71	+1.0
3,107,365	-		CCNA_02946	0.73	-1.7
3,107,386	+		CCNA_02946	0.75	+0.1
3,107,394	-		CCNA_02946	0.77	+0.3
3,107,401	-		CCNA_02946	0.78	-0.6
3,107,413	-		CCNA_02946	0.79	-1.5
3,107,413	-		CCNA_02946	0.79	+0.0
3,107,459	-		CCNA_02946	0.86	-1.8
3,107,459	-		CCNA_02946	0.86	-0.5
3,107,465	+		CCNA_02946	0.86	+0.8
3,107,521	+				-1.2
3,107,537	-				+3.8
3,107,563	-				-0.1
3,107,573	+				-0.4
3,107,573	+				-0.0
3,107,573	+				+0.6
3,107,578	+				+2.0
3,107,581	-				-0.1
3,107,581	-				+1.5
3,107,608	+				+1.0
3,107,624	+				+2.1
3,107,625	+				+1.2
3,107,631	-				+0.3
3,107,631	-				-0.9