Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02877

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
3,023,600	+				+1.4
3,023,617	+		CCNA_02873	0.50	+0.4
3,023,623	+		CCNA_02873	0.52	+0.6
3,023,638	+		CCNA_02873	0.56	+2.4
3,023,660	+		CCNA_02873	0.62	-0.3
3,023,660	+		CCNA_02873	0.62	+0.6
3,023,668	-		CCNA_02873	0.64	+0.1
3,023,688	+		CCNA_02873	0.69	-0.1
3,023,696	-		CCNA_02873	0.72	+0.1
3,023,716	+		CCNA_02873	0.77	+0.5
3,023,755	+		CCNA_02873	0.88	-1.2
3,023,771	+				-0.3
3,023,777	-				+0.3
3,023,839	+		CCNA_02874	0.16	+0.4
3,023,839	+		CCNA_02874	0.16	+0.0
3,023,846	+		CCNA_02874	0.18	+1.6
3,023,847	-		CCNA_02874	0.18	+0.3
3,023,847	-				+1.6
3,023,847	-		CCNA_02874	0.18	+1.9
3,023,847	-		CCNA_02874	0.18	+0.9
3,023,871	+		CCNA_02874	0.24	+0.0
3,023,872	+		CCNA_02874	0.24	+1.1
3,023,887	+		CCNA_02874	0.28	+0.3
3,023,887	+		CCNA_02874	0.28	-0.2
3,023,897	+		CCNA_02874	0.30	+0.5
3,023,932	+		CCNA_02874	0.38	-0.6
3,023,940	-		CCNA_02874	0.40	+0.8
3,023,957	-		CCNA_02874	0.44	+0.8
3,023,959	-		CCNA_02874	0.45	-0.5
3,023,963	-		CCNA_02874	0.46	+0.9
3,024,001	+		CCNA_02874	0.55	-0.4
3,024,096	-		CCNA_02874	0.78	-0.5
3,024,106	-		CCNA_02874	0.80	-1.1
3,024,142	+		CCNA_02874	0.89	-0.6
3,024,142	+		CCNA_02874	0.89	-1.5
3,024,147	+				+0.2
3,024,150	-				+0.6
3,024,171	+				+2.2
3,024,177	-				-0.6
3,024,217	+				-1.6
3,024,217	+				+3.6
3,024,225	-		CCNA_02875	0.12	-2.2
3,024,236	+		CCNA_02875	0.15	+0.2
3,024,259	+		CCNA_02875	0.20	+0.6
3,024,280	+		CCNA_02875	0.26	+0.8
3,024,335	+		CCNA_02875	0.39	+1.5
3,024,335	+		CCNA_02875	0.39	+1.8
3,024,335	+		CCNA_02875	0.39	+2.0
3,024,340	+		CCNA_02875	0.41	-0.5
3,024,342	+		CCNA_02875	0.41	+0.7
3,024,343	-		CCNA_02875	0.41	+0.8
3,024,381	-		CCNA_02875	0.51	+0.6
3,024,385	+		CCNA_02875	0.52	+0.1
3,024,401	-		CCNA_02875	0.56	-1.3
3,024,418	+		CCNA_02875	0.60	-0.8
3,024,435	+		CCNA_02875	0.64	-0.2
3,024,449	+		CCNA_02875	0.68	+0.2
3,024,532	-		CCNA_02875	0.89	+1.6
3,024,629	+				+0.3
3,024,655	+				+0.5
3,024,663	-				+1.1
3,024,666	-				+0.8
3,024,757	-		CCNA_02877	0.13	-1.0
3,024,762	-		CCNA_02877	0.13	+0.4
3,024,774	-		CCNA_02877	0.14	-0.7
3,024,780	-		CCNA_02877	0.14	-0.2
3,024,885	-		CCNA_02877	0.22	-0.5
3,024,915	+		CCNA_02877	0.25	-2.0
3,024,924	-		CCNA_02877	0.25	-1.3
3,024,930	+		CCNA_02877	0.26	+0.8
3,024,945	-		CCNA_02877	0.27	-1.5
3,024,965	-		CCNA_02877	0.28	+0.5
3,025,023	+		CCNA_02877	0.33	-2.1
3,025,028	+		CCNA_02877	0.33	+1.9
3,025,028	+		CCNA_02877	0.33	+3.3
3,025,028	+		CCNA_02877	0.33	-0.4
3,025,028	+		CCNA_02877	0.33	+1.4
3,025,028	+		CCNA_02877	0.33	+0.0
3,025,028	+		CCNA_02877	0.33	+0.6
3,025,028	+		CCNA_02877	0.33	-0.5
3,025,028	+		CCNA_02877	0.33	+0.1
3,025,028	+		CCNA_02877	0.33	-0.6
3,025,028	+				+2.6
3,025,028	+		CCNA_02877	0.33	+1.0
3,025,028	+		CCNA_02877	0.33	-0.6
3,025,028	+		CCNA_02877	0.33	-0.1
3,025,028	+		CCNA_02877	0.33	+1.0
3,025,028	+		CCNA_02877	0.33	+0.7
3,025,028	+		CCNA_02877	0.33	-1.0
3,025,028	+		CCNA_02877	0.33	+0.2
3,025,028	+		CCNA_02877	0.33	+0.5
3,025,028	+		CCNA_02877	0.33	+0.0
3,025,028	+		CCNA_02877	0.33	-2.1
3,025,031	-		CCNA_02877	0.33	-1.7
3,025,036	-		CCNA_02877	0.34	-0.4
3,025,036	-		CCNA_02877	0.34	+0.0
3,025,036	-		CCNA_02877	0.34	+2.2
3,025,036	-		CCNA_02877	0.34	-0.2
3,025,036	-		CCNA_02877	0.34	-0.4
3,025,036	-		CCNA_02877	0.34	+1.4
3,025,036	-		CCNA_02877	0.34	-0.7
3,025,036	-		CCNA_02877	0.34	-0.0
3,025,082	+		CCNA_02877	0.37	+1.4
3,025,117	+		CCNA_02877	0.40	-0.7
3,025,132	+		CCNA_02877	0.41	-0.4
3,025,140	-		CCNA_02877	0.41	-0.4
3,025,231	+		CCNA_02877	0.48	+0.2
3,025,232	-		CCNA_02877	0.48	+0.0
3,025,232	-		CCNA_02877	0.48	-0.1
3,025,262	+		CCNA_02877	0.51	-1.1
3,025,267	+		CCNA_02877	0.51	+1.9
3,025,289	+		CCNA_02877	0.53	+2.3
3,025,293	+		CCNA_02877	0.53	+2.4
3,025,358	+		CCNA_02877	0.58	-1.4
3,025,358	+		CCNA_02877	0.58	+1.2
3,025,358	+		CCNA_02877	0.58	+0.6
3,025,358	+		CCNA_02877	0.58	+0.3
3,025,366	-				+1.6
3,025,376	+		CCNA_02877	0.59	+0.0
3,025,376	+		CCNA_02877	0.59	-1.5
3,025,389	-		CCNA_02877	0.60	-1.0
3,025,428	+		CCNA_02877	0.63	+2.0
3,025,463	+		CCNA_02877	0.66	+2.9
3,025,473	+		CCNA_02877	0.67	-0.5
3,025,473	+		CCNA_02877	0.67	-0.8
3,025,473	+		CCNA_02877	0.67	-0.0
3,025,473	+		CCNA_02877	0.67	+0.3
3,025,473	+		CCNA_02877	0.67	+0.2
3,025,473	+		CCNA_02877	0.67	+0.9
3,025,473	+		CCNA_02877	0.67	-1.0
3,025,473	+		CCNA_02877	0.67	-2.6
3,025,473	+		CCNA_02877	0.67	+1.0
3,025,473	+		CCNA_02877	0.67	-0.7
3,025,473	+		CCNA_02877	0.67	-0.2
3,025,473	+		CCNA_02877	0.67	+0.8
3,025,481	-		CCNA_02877	0.67	+0.8
3,025,481	-		CCNA_02877	0.67	-1.7
3,025,481	-		CCNA_02877	0.67	+0.1
3,025,481	-		CCNA_02877	0.67	-2.2
3,025,481	-		CCNA_02877	0.67	-1.0
3,025,481	-		CCNA_02877	0.67	-1.1
3,025,481	-		CCNA_02877	0.67	+3.8
3,025,481	-		CCNA_02877	0.67	+0.0
3,025,481	-		CCNA_02877	0.67	-0.0
3,025,481	-		CCNA_02877	0.67	+1.2
3,025,481	-		CCNA_02877	0.67	-1.0
3,025,481	-		CCNA_02877	0.67	+0.8
3,025,481	-		CCNA_02877	0.67	+1.0
3,025,481	-		CCNA_02877	0.67	+0.6
3,025,481	-		CCNA_02877	0.67	-0.4
3,025,486	-		CCNA_02877	0.67	+0.6
3,025,486	-		CCNA_02877	0.67	-0.8
3,025,486	-		CCNA_02877	0.67	-0.3
3,025,530	-		CCNA_02877	0.71	+1.6
3,025,578	+		CCNA_02877	0.74	-0.5
3,025,584	-		CCNA_02877	0.75	-0.1
3,025,596	-		CCNA_02877	0.76	-1.7
3,025,611	-		CCNA_02877	0.77	+0.9
3,025,623	-		CCNA_02877	0.78	-2.0
3,025,634	+		CCNA_02877	0.79	+0.9
3,025,634	+		CCNA_02877	0.79	+0.1
3,025,634	+		CCNA_02877	0.79	+0.3
3,025,642	-		CCNA_02877	0.79	-0.3
3,025,642	-		CCNA_02877	0.79	+0.3
3,025,642	-		CCNA_02877	0.79	-2.3
3,025,694	+		CCNA_02877	0.83	+2.5
3,025,694	+		CCNA_02877	0.83	+0.9
3,025,694	+		CCNA_02877	0.83	+1.6
3,025,702	+		CCNA_02877	0.84	+0.4
3,025,702	-		CCNA_02877	0.84	-0.0
3,025,703	+		CCNA_02877	0.84	-1.0
3,025,725	+		CCNA_02877	0.85	-0.5
3,025,725	+		CCNA_02877	0.85	-0.2
3,025,725	+		CCNA_02877	0.85	+1.6
3,025,733	-		CCNA_02877	0.86	+0.2
3,025,735	+		CCNA_02877	0.86	-0.4
3,025,793	+				-1.3
3,025,896	+				+0.1
3,025,910	-				+0.9
3,025,960	+		CCNA_02876	0.16	+0.9
3,025,968	-		CCNA_02876	0.18	+0.5
3,025,968	-		CCNA_02876	0.18	+1.9
3,025,968	-		CCNA_02876	0.18	-0.1
3,025,978	-		CCNA_02876	0.20	+2.2
3,025,985	+		CCNA_02876	0.22	+1.0
3,025,985	+		CCNA_02876	0.22	+0.4
3,025,985	+		CCNA_02876	0.22	-1.2
3,025,995	+		CCNA_02876	0.24	+0.5
3,026,002	+		CCNA_02876	0.26	+1.2
3,026,003	-		CCNA_02876	0.26	+0.0
3,026,036	-		CCNA_02876	0.33	+0.0
3,026,082	+		CCNA_02876	0.44	-0.2
3,026,143	+		CCNA_02876	0.58	-0.1
3,026,151	-		CCNA_02876	0.59	+0.4
3,026,152	+		CCNA_02876	0.60	+0.3
3,026,191	-		CCNA_02876	0.68	+0.8
3,026,191	-		CCNA_02876	0.68	+0.9
3,026,191	-		CCNA_02876	0.68	+0.1
3,026,218	-		CCNA_02876	0.75	+0.6
3,026,241	+		CCNA_02876	0.80	+0.4
3,026,286	-				-0.5
3,026,286	-				+0.2
3,026,288	+				-0.5
3,026,291	-				-0.2
3,026,296	-				+0.6
3,026,296	-				-1.1
3,026,296	-				-0.1
3,026,376	-				+1.4
3,026,376	-				+0.1
3,026,380	-				-0.9
3,026,394	+				-2.6
3,026,417	+				-1.8
3,026,417	+				-0.3
3,026,453	-				-0.0
3,026,473	-				+0.1
3,026,473	-				-1.1
3,026,563	-				-1.3
3,026,594	-		CCNA_02878	0.23	-0.1
3,026,596	-		CCNA_02878	0.25	+1.0
3,026,721	+				-0.4
3,026,731	+				+1.3
3,026,748	+				+0.6
3,026,788	-				+0.3
3,026,827	-		CCNA_02879	0.39	-0.1
3,026,890	-				+1.9
3,026,890	-				-1.4
3,026,908	-				+0.8