Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01593

Experiment: PYE with Benzalkonium Chloride 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Benzalkonium Chloride 0.0001 mg/ml
1,712,088	+		CCNA_01591	0.60	-0.9
1,712,114	+		CCNA_01591	0.64	-1.0
1,712,176	+		CCNA_01591	0.74	-1.5
1,712,184	-		CCNA_01591	0.76	-0.7
1,712,297	-				-0.8
1,712,331	+				-1.1
1,712,422	-				-0.4
1,712,422	-				+0.5
1,712,463	-				+0.7
1,712,547	-		CCNA_01592	0.22	-1.2
1,712,569	+		CCNA_01592	0.27	+0.4
1,712,570	+		CCNA_01592	0.27	+1.4
1,712,611	+		CCNA_01592	0.37	+1.6
1,712,619	-		CCNA_01592	0.39	-1.2
1,712,624	-		CCNA_01592	0.40	-2.0
1,712,624	-		CCNA_01592	0.40	-0.1
1,712,626	+		CCNA_01592	0.40	+1.1
1,712,626	+		CCNA_01592	0.40	-0.6
1,712,626	+		CCNA_01592	0.40	+1.7
1,712,631	+		CCNA_01592	0.41	+0.1
1,712,634	-		CCNA_01592	0.42	+0.5
1,712,634	-		CCNA_01592	0.42	+0.8
1,712,653	+		CCNA_01592	0.47	+1.1
1,712,682	+		CCNA_01592	0.53	+0.3
1,712,708	+		CCNA_01592	0.59	+0.8
1,712,755	+		CCNA_01592	0.70	+2.0
1,712,761	-		CCNA_01592	0.72	-0.1
1,712,763	-		CCNA_01592	0.72	-0.7
1,712,800	+		CCNA_01592	0.81	+0.3
1,712,848	+				+1.2
1,712,848	+				+0.1
1,712,848	+				-0.9
1,712,920	+				+0.5
1,712,960	+				-0.4
1,712,964	+				+0.2
1,712,972	-				+1.2
1,713,026	-				+2.2
1,713,084	-				+2.4
1,713,379	+		CCNA_01593	0.20	+2.0
1,713,379	+		CCNA_01593	0.20	+0.8
1,713,441	+		CCNA_01593	0.23	+1.7
1,713,444	-		CCNA_01593	0.23	+2.6
1,713,477	-		CCNA_01593	0.25	+2.2
1,713,533	-		CCNA_01593	0.28	+1.5
1,713,667	-		CCNA_01593	0.36	+1.9
1,713,800	+		CCNA_01593	0.43	+1.5
1,713,800	+		CCNA_01593	0.43	+0.2
1,713,803	-		CCNA_01593	0.43	+0.4
1,713,808	-		CCNA_01593	0.43	+2.4
1,713,836	+		CCNA_01593	0.45	+0.9
1,713,836	+		CCNA_01593	0.45	+0.7
1,713,844	-		CCNA_01593	0.45	+2.8
1,713,844	-		CCNA_01593	0.45	+1.8
1,713,935	+		CCNA_01593	0.50	-0.4
1,713,978	+		CCNA_01593	0.53	+0.1
1,713,983	+		CCNA_01593	0.53	-0.5
1,713,986	-		CCNA_01593	0.53	+1.9
1,713,986	-		CCNA_01593	0.53	+2.5
1,714,025	+		CCNA_01593	0.55	+1.9
1,714,067	-		CCNA_01593	0.58	+2.8
1,714,090	+				+1.5
1,714,090	+		CCNA_01593	0.59	+2.7
1,714,090	+		CCNA_01593	0.59	-0.0
1,714,090	+		CCNA_01593	0.59	+1.3
1,714,098	-		CCNA_01593	0.59	+3.2
1,714,142	+		CCNA_01593	0.62	+0.2
1,714,171	-		CCNA_01593	0.64	+2.6
1,714,242	-		CCNA_01593	0.67	+1.9
1,714,365	+		CCNA_01593	0.74	+1.2
1,714,365	+		CCNA_01593	0.74	+1.5
1,714,373	-		CCNA_01593	0.75	+3.0
1,714,432	+		CCNA_01593	0.78	+4.0
1,714,526	+		CCNA_01593	0.83	+0.7
1,714,636	-		CCNA_01593	0.89	+1.5
1,714,763	-				+3.0
1,714,804	-				+0.6
1,714,820	+				+1.1
1,714,828	-				+1.7
1,714,839	+				-0.1
1,714,844	+				+1.3
1,714,863	-				-0.4
1,714,887	+				-0.6
1,714,895	-				-1.4
1,714,925	-				-0.5
1,714,931	-				+0.7
1,714,940	-				+1.4
1,714,949	+				+0.9
1,714,951	+				+0.3
1,714,951	+				-0.7
1,714,957	-				+0.8
1,714,957	-				+0.0
1,714,957	-				+1.4
1,714,957	-				+0.4
1,714,959	-				+0.8
1,715,091	-				+1.1
1,715,099	-				+1.0
1,715,117	+				+1.6
1,715,125	-		CCNA_01594	0.10	+0.4
1,715,138	+		CCNA_01594	0.12	-1.4
1,715,207	-		CCNA_01594	0.20	+0.4
1,715,212	-		CCNA_01594	0.20	+1.0
1,715,239	+		CCNA_01594	0.24	-0.9
1,715,247	-		CCNA_01594	0.24	+0.4
1,715,285	+		CCNA_01594	0.29	+1.4
1,715,291	-		CCNA_01594	0.30	+0.8
1,715,334	+		CCNA_01594	0.34	-0.7
1,715,342	-		CCNA_01594	0.35	+1.0
1,715,390	-		CCNA_01594	0.41	+0.5
1,715,480	-		CCNA_01594	0.51	-1.0
1,715,482	+		CCNA_01594	0.52	-1.5
1,715,490	-		CCNA_01594	0.52	+0.4
1,715,501	+		CCNA_01594	0.54	+0.0
1,715,504	+		CCNA_01594	0.54	+1.3
1,715,504	+		CCNA_01594	0.54	-0.4
1,715,563	+		CCNA_01594	0.61	-0.6
1,715,640	-		CCNA_01594	0.70	+0.7
1,715,657	+		CCNA_01594	0.72	-0.1
1,715,670	-		CCNA_01594	0.73	-0.2
1,715,814	-		CCNA_01594	0.90	+1.8
1,715,829	-				+2.0
1,715,829	-				-0.9