Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS17265

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS17260 and ABZR86_RS17265 are separated by 275 nucleotidesABZR86_RS17265 and ABZR86_RS17270 are separated by 4 nucleotides ABZR86_RS17260: ABZR86_RS17260 - hypothetical protein, at 3,897,419 to 3,898,243 _RS17260 ABZR86_RS17265: ABZR86_RS17265 - PD40 domain-containing protein, at 3,898,519 to 3,899,412 _RS17265 ABZR86_RS17270: ABZR86_RS17270 - chloride channel protein, at 3,899,417 to 3,901,183 _RS17270 Position (kb) 3898 3899 3900Strain fitness (log2 ratio) -2 -1 0 1at 3897.611 kb on + strand, within ABZR86_RS17260at 3897.611 kb on + strand, within ABZR86_RS17260at 3897.611 kb on + strand, within ABZR86_RS17260at 3897.611 kb on + strand, within ABZR86_RS17260at 3897.612 kb on - strand, within ABZR86_RS17260at 3897.612 kb on - strand, within ABZR86_RS17260at 3897.612 kb on - strand, within ABZR86_RS17260at 3897.632 kb on - strand, within ABZR86_RS17260at 3897.632 kb on - strand, within ABZR86_RS17260at 3897.701 kb on + strand, within ABZR86_RS17260at 3897.702 kb on - strand, within ABZR86_RS17260at 3897.788 kb on + strand, within ABZR86_RS17260at 3897.788 kb on + strand, within ABZR86_RS17260at 3897.788 kb on + strand, within ABZR86_RS17260at 3897.788 kb on + strand, within ABZR86_RS17260at 3897.788 kb on + strand, within ABZR86_RS17260at 3897.788 kb on + strand, within ABZR86_RS17260at 3897.789 kb on - strand, within ABZR86_RS17260at 3897.789 kb on - strand, within ABZR86_RS17260at 3897.789 kb on - strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.950 kb on + strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.951 kb on - strand, within ABZR86_RS17260at 3897.956 kb on + strand, within ABZR86_RS17260at 3897.956 kb on + strand, within ABZR86_RS17260at 3897.957 kb on - strand, within ABZR86_RS17260at 3897.957 kb on - strand, within ABZR86_RS17260at 3897.957 kb on - strand, within ABZR86_RS17260at 3897.957 kb on - strand, within ABZR86_RS17260at 3897.957 kb on - strand, within ABZR86_RS17260at 3898.055 kb on + strand, within ABZR86_RS17260at 3898.055 kb on + strand, within ABZR86_RS17260at 3898.055 kb on + strand, within ABZR86_RS17260at 3898.055 kb on + strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.056 kb on - strand, within ABZR86_RS17260at 3898.061 kb on + strand, within ABZR86_RS17260at 3898.061 kb on + strand, within ABZR86_RS17260at 3898.061 kb on + strand, within ABZR86_RS17260at 3898.062 kb on - strand, within ABZR86_RS17260at 3898.062 kb on - strand, within ABZR86_RS17260at 3898.062 kb on - strand, within ABZR86_RS17260at 3898.063 kb on + strand, within ABZR86_RS17260at 3898.064 kb on - strand, within ABZR86_RS17260at 3898.095 kb on + strand, within ABZR86_RS17260at 3898.241 kb on + strandat 3898.248 kb on + strandat 3898.419 kb on - strandat 3898.420 kb on + strandat 3898.420 kb on + strandat 3898.421 kb on - strandat 3898.426 kb on + strandat 3898.427 kb on - strandat 3898.453 kb on - strandat 3898.453 kb on - strandat 3898.453 kb on - strandat 3898.453 kb on - strandat 3898.453 kb on - strandat 3898.480 kb on + strandat 3898.480 kb on + strandat 3898.481 kb on - strandat 3898.481 kb on - strandat 3898.481 kb on - strandat 3898.481 kb on - strandat 3898.481 kb on - strandat 3898.675 kb on + strand, within ABZR86_RS17265at 3898.676 kb on - strand, within ABZR86_RS17265at 3898.676 kb on - strand, within ABZR86_RS17265at 3898.676 kb on - strand, within ABZR86_RS17265at 3898.676 kb on - strand, within ABZR86_RS17265at 3898.676 kb on - strand, within ABZR86_RS17265at 3898.825 kb on + strand, within ABZR86_RS17265at 3898.825 kb on + strand, within ABZR86_RS17265at 3898.825 kb on + strand, within ABZR86_RS17265at 3898.826 kb on - strand, within ABZR86_RS17265at 3898.876 kb on - strand, within ABZR86_RS17265at 3898.876 kb on - strand, within ABZR86_RS17265at 3898.876 kb on - strand, within ABZR86_RS17265at 3898.993 kb on + strand, within ABZR86_RS17265at 3898.993 kb on + strand, within ABZR86_RS17265at 3898.993 kb on + strand, within ABZR86_RS17265at 3899.116 kb on + strand, within ABZR86_RS17265at 3899.117 kb on - strand, within ABZR86_RS17265at 3899.176 kb on + strand, within ABZR86_RS17265at 3899.177 kb on - strand, within ABZR86_RS17265at 3899.670 kb on - strand, within ABZR86_RS17270at 3899.865 kb on + strand, within ABZR86_RS17270at 3899.865 kb on + strand, within ABZR86_RS17270at 3899.865 kb on + strand, within ABZR86_RS17270at 3899.958 kb on + strand, within ABZR86_RS17270at 3899.959 kb on - strand, within ABZR86_RS17270at 3899.959 kb on - strand, within ABZR86_RS17270at 3899.959 kb on - strand, within ABZR86_RS17270at 3900.123 kb on + strand, within ABZR86_RS17270at 3900.123 kb on + strand, within ABZR86_RS17270at 3900.123 kb on + strand, within ABZR86_RS17270at 3900.124 kb on - strand, within ABZR86_RS17270at 3900.298 kb on + strand, within ABZR86_RS17270at 3900.298 kb on + strand, within ABZR86_RS17270at 3900.299 kb on - strand, within ABZR86_RS17270at 3900.299 kb on - strand, within ABZR86_RS17270at 3900.299 kb on - strand, within ABZR86_RS17270at 3900.306 kb on + strand, within ABZR86_RS17270at 3900.306 kb on + strand, within ABZR86_RS17270at 3900.336 kb on + strand, within ABZR86_RS17270

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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3,897,611 + ABZR86_RS17260 0.23 +0.2
3,897,611 + ABZR86_RS17260 0.23 +0.1
3,897,611 + ABZR86_RS17260 0.23 -0.7
3,897,611 + ABZR86_RS17260 0.23 +0.5
3,897,612 - ABZR86_RS17260 0.23 +0.5
3,897,612 - ABZR86_RS17260 0.23 +0.9
3,897,612 - ABZR86_RS17260 0.23 -0.6
3,897,632 - ABZR86_RS17260 0.26 +0.1
3,897,632 - ABZR86_RS17260 0.26 +0.3
3,897,701 + ABZR86_RS17260 0.34 +0.3
3,897,702 - ABZR86_RS17260 0.34 -0.8
3,897,788 + ABZR86_RS17260 0.45 -0.2
3,897,788 + ABZR86_RS17260 0.45 -0.4
3,897,788 + ABZR86_RS17260 0.45 +0.2
3,897,788 + ABZR86_RS17260 0.45 -0.7
3,897,788 + ABZR86_RS17260 0.45 +0.7
3,897,788 + ABZR86_RS17260 0.45 +0.4
3,897,789 - ABZR86_RS17260 0.45 +0.1
3,897,789 - ABZR86_RS17260 0.45 -1.2
3,897,789 - ABZR86_RS17260 0.45 +0.3
3,897,950 + ABZR86_RS17260 0.64 +0.6
3,897,950 + ABZR86_RS17260 0.64 +0.1
3,897,950 + ABZR86_RS17260 0.64 +0.6
3,897,950 + ABZR86_RS17260 0.64 +0.8
3,897,950 + ABZR86_RS17260 0.64 +0.1
3,897,950 + ABZR86_RS17260 0.64 -0.1
3,897,950 + ABZR86_RS17260 0.64 -0.3
3,897,951 - ABZR86_RS17260 0.64 -0.4
3,897,951 - ABZR86_RS17260 0.64 -0.4
3,897,951 - ABZR86_RS17260 0.64 +0.0
3,897,951 - ABZR86_RS17260 0.64 -0.4
3,897,951 - ABZR86_RS17260 0.64 +0.3
3,897,951 - ABZR86_RS17260 0.64 +1.1
3,897,951 - ABZR86_RS17260 0.64 -2.5
3,897,951 - ABZR86_RS17260 0.64 +0.2
3,897,951 - ABZR86_RS17260 0.64 -0.1
3,897,951 - ABZR86_RS17260 0.64 -0.1
3,897,951 - ABZR86_RS17260 0.64 -0.1
3,897,951 - ABZR86_RS17260 0.64 +0.3
3,897,956 + ABZR86_RS17260 0.65 -0.2
3,897,956 + ABZR86_RS17260 0.65 -0.2
3,897,957 - ABZR86_RS17260 0.65 -1.6
3,897,957 - ABZR86_RS17260 0.65 +0.7
3,897,957 - ABZR86_RS17260 0.65 -0.5
3,897,957 - ABZR86_RS17260 0.65 +0.6
3,897,957 - ABZR86_RS17260 0.65 +0.3
3,898,055 + ABZR86_RS17260 0.77 +0.6
3,898,055 + ABZR86_RS17260 0.77 -0.3
3,898,055 + ABZR86_RS17260 0.77 +1.2
3,898,055 + ABZR86_RS17260 0.77 +0.8
3,898,056 - ABZR86_RS17260 0.77 +0.1
3,898,056 - ABZR86_RS17260 0.77 -0.8
3,898,056 - ABZR86_RS17260 0.77 +0.5
3,898,056 - ABZR86_RS17260 0.77 -1.0
3,898,056 - ABZR86_RS17260 0.77 +0.1
3,898,056 - ABZR86_RS17260 0.77 +0.0
3,898,056 - ABZR86_RS17260 0.77 -0.4
3,898,056 - ABZR86_RS17260 0.77 -0.6
3,898,061 + ABZR86_RS17260 0.78 -0.9
3,898,061 + ABZR86_RS17260 0.78 +0.5
3,898,061 + ABZR86_RS17260 0.78 -0.6
3,898,062 - ABZR86_RS17260 0.78 +0.7
3,898,062 - ABZR86_RS17260 0.78 -0.7
3,898,062 - ABZR86_RS17260 0.78 +0.7
3,898,063 + ABZR86_RS17260 0.78 -0.0
3,898,064 - ABZR86_RS17260 0.78 +0.2
3,898,095 + ABZR86_RS17260 0.82 +1.5
3,898,241 + +0.3
3,898,248 + -0.7
3,898,419 - +0.3
3,898,420 + +1.1
3,898,420 + -0.1
3,898,421 - +0.7
3,898,426 + -0.1
3,898,427 - -0.8
3,898,453 - -0.1
3,898,453 - -0.7
3,898,453 - -0.3
3,898,453 - +0.3
3,898,453 - -0.9
3,898,480 + -0.7
3,898,480 + +0.3
3,898,481 - -0.6
3,898,481 - -0.1
3,898,481 - -0.4
3,898,481 - -0.1
3,898,481 - -0.7
3,898,675 + ABZR86_RS17265 0.17 +0.9
3,898,676 - ABZR86_RS17265 0.18 +0.1
3,898,676 - ABZR86_RS17265 0.18 -0.3
3,898,676 - ABZR86_RS17265 0.18 -0.1
3,898,676 - ABZR86_RS17265 0.18 -1.0
3,898,676 - ABZR86_RS17265 0.18 +0.1
3,898,825 + ABZR86_RS17265 0.34 -0.0
3,898,825 + ABZR86_RS17265 0.34 -0.1
3,898,825 + ABZR86_RS17265 0.34 -0.0
3,898,826 - ABZR86_RS17265 0.34 -1.3
3,898,876 - ABZR86_RS17265 0.40 +0.2
3,898,876 - ABZR86_RS17265 0.40 +0.1
3,898,876 - ABZR86_RS17265 0.40 +0.6
3,898,993 + ABZR86_RS17265 0.53 -0.2
3,898,993 + ABZR86_RS17265 0.53 +0.3
3,898,993 + ABZR86_RS17265 0.53 -0.9
3,899,116 + ABZR86_RS17265 0.67 -0.2
3,899,117 - ABZR86_RS17265 0.67 -1.2
3,899,176 + ABZR86_RS17265 0.73 +0.1
3,899,177 - ABZR86_RS17265 0.74 +0.7
3,899,670 - ABZR86_RS17270 0.14 -0.6
3,899,865 + ABZR86_RS17270 0.25 +0.3
3,899,865 + ABZR86_RS17270 0.25 -0.3
3,899,865 + ABZR86_RS17270 0.25 -0.0
3,899,958 + ABZR86_RS17270 0.31 +0.4
3,899,959 - ABZR86_RS17270 0.31 +0.2
3,899,959 - ABZR86_RS17270 0.31 +0.8
3,899,959 - ABZR86_RS17270 0.31 -0.3
3,900,123 + ABZR86_RS17270 0.40 +0.8
3,900,123 + ABZR86_RS17270 0.40 -0.9
3,900,123 + ABZR86_RS17270 0.40 +0.0
3,900,124 - ABZR86_RS17270 0.40 +0.5
3,900,298 + ABZR86_RS17270 0.50 -0.3
3,900,298 + ABZR86_RS17270 0.50 +0.6
3,900,299 - ABZR86_RS17270 0.50 -0.6
3,900,299 - ABZR86_RS17270 0.50 +0.4
3,900,299 - ABZR86_RS17270 0.50 +1.2
3,900,306 + ABZR86_RS17270 0.50 +0.2
3,900,306 + ABZR86_RS17270 0.50 +0.3
3,900,336 + ABZR86_RS17270 0.52 +0.5

Or see this region's nucleotide sequence