Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS15030 and ABZR86_RS15035 are separated by 540 nucleotides ABZR86_RS15035 and ABZR86_RS15040 are separated by 71 nucleotides
ABZR86_RS15030: ABZR86_RS15030 - TonB-dependent receptor, at 3,377,282 to 3,380,260
_RS15030
ABZR86_RS15035: ABZR86_RS15035 - ATP-dependent protease subunit HslV, at 3,380,801 to 3,381,352
_RS15035
ABZR86_RS15040: ABZR86_RS15040 - ATP-dependent protease ATPase subunit HslU, at 3,381,424 to 3,382,758
_RS15040
Position (kb)
3380
3381
3382 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3379.849 kb on + strand, within ABZR86_RS15030 at 3379.849 kb on + strand, within ABZR86_RS15030 at 3380.034 kb on + strand at 3380.034 kb on + strand at 3380.034 kb on + strand at 3380.034 kb on + strand at 3380.035 kb on - strand at 3380.035 kb on - strand at 3380.035 kb on - strand at 3380.035 kb on - strand at 3380.281 kb on + strand at 3380.281 kb on + strand at 3380.281 kb on + strand at 3380.281 kb on + strand at 3380.282 kb on - strand at 3380.282 kb on - strand at 3380.282 kb on - strand at 3380.383 kb on + strand at 3380.383 kb on + strand at 3380.383 kb on + strand at 3380.384 kb on - strand at 3380.384 kb on - strand at 3380.384 kb on - strand at 3380.515 kb on + strand at 3380.516 kb on - strand at 3380.651 kb on - strand at 3381.200 kb on + strand, within ABZR86_RS15035 at 3381.200 kb on + strand, within ABZR86_RS15035 at 3381.200 kb on + strand, within ABZR86_RS15035 at 3381.200 kb on + strand, within ABZR86_RS15035 at 3381.200 kb on + strand, within ABZR86_RS15035 at 3381.200 kb on + strand, within ABZR86_RS15035 at 3381.201 kb on - strand, within ABZR86_RS15035 at 3381.201 kb on - strand, within ABZR86_RS15035 at 3381.299 kb on + strand at 3381.299 kb on + strand at 3381.299 kb on + strand at 3381.299 kb on + strand at 3381.299 kb on + strand at 3381.299 kb on + strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.300 kb on - strand at 3381.301 kb on + strand at 3381.301 kb on + strand at 3381.302 kb on - strand at 3381.336 kb on + strand at 3381.336 kb on + strand at 3381.336 kb on + strand at 3381.336 kb on + strand at 3381.336 kb on + strand at 3381.337 kb on - strand at 3381.337 kb on - strand at 3381.337 kb on - strand at 3381.337 kb on - strand at 3381.337 kb on - strand at 3381.343 kb on + strand at 3381.344 kb on - strand at 3381.350 kb on + strand at 3381.351 kb on - strand at 3381.386 kb on + strand at 3381.387 kb on - strand at 3381.400 kb on + strand at 3381.400 kb on + strand at 3381.400 kb on + strand at 3381.400 kb on + strand at 3381.401 kb on - strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.469 kb on + strand at 3381.470 kb on - strand at 3381.470 kb on - strand at 3381.470 kb on - strand at 3381.694 kb on + strand, within ABZR86_RS15040 at 3381.694 kb on + strand, within ABZR86_RS15040 at 3381.694 kb on + strand, within ABZR86_RS15040 at 3381.694 kb on + strand, within ABZR86_RS15040 at 3381.694 kb on + strand, within ABZR86_RS15040 at 3381.694 kb on + strand, within ABZR86_RS15040 at 3381.695 kb on - strand, within ABZR86_RS15040 at 3381.695 kb on - strand, within ABZR86_RS15040 at 3381.745 kb on + strand, within ABZR86_RS15040 at 3381.745 kb on + strand, within ABZR86_RS15040 at 3381.745 kb on + strand, within ABZR86_RS15040 at 3381.745 kb on + strand, within ABZR86_RS15040 at 3381.746 kb on - strand, within ABZR86_RS15040 at 3381.746 kb on - strand, within ABZR86_RS15040 at 3381.746 kb on - strand, within ABZR86_RS15040 at 3381.746 kb on - strand, within ABZR86_RS15040 at 3381.746 kb on - strand, within ABZR86_RS15040 at 3381.746 kb on - strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.159 kb on + strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.160 kb on - strand, within ABZR86_RS15040 at 3382.306 kb on + strand, within ABZR86_RS15040 at 3382.306 kb on + strand, within ABZR86_RS15040 at 3382.306 kb on + strand, within ABZR86_RS15040 at 3382.307 kb on - strand, within ABZR86_RS15040 at 3382.307 kb on - strand, within ABZR86_RS15040 at 3382.307 kb on - strand, within ABZR86_RS15040 at 3382.307 kb on - strand, within ABZR86_RS15040
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,379,849 + ABZR86_RS15030 0.86 -1.7 3,379,849 + ABZR86_RS15030 0.86 +0.9 3,380,034 + -0.4 3,380,034 + -1.0 3,380,034 + +0.4 3,380,034 + +0.4 3,380,035 - +0.2 3,380,035 - +0.0 3,380,035 - +0.7 3,380,035 - +0.1 3,380,281 + -0.5 3,380,281 + -0.0 3,380,281 + -0.1 3,380,281 + +0.2 3,380,282 - -0.3 3,380,282 - -0.5 3,380,282 - -1.1 3,380,383 + +0.4 3,380,383 + +0.1 3,380,383 + -0.2 3,380,384 - -0.8 3,380,384 - -0.6 3,380,384 - -0.2 3,380,515 + -1.1 3,380,516 - -0.6 3,380,651 - +0.4 3,381,200 + ABZR86_RS15035 0.72 -0.1 3,381,200 + ABZR86_RS15035 0.72 +0.8 3,381,200 + ABZR86_RS15035 0.72 +1.8 3,381,200 + ABZR86_RS15035 0.72 +0.6 3,381,200 + ABZR86_RS15035 0.72 +1.3 3,381,200 + ABZR86_RS15035 0.72 -0.1 3,381,201 - ABZR86_RS15035 0.72 +0.1 3,381,201 - ABZR86_RS15035 0.72 -0.0 3,381,299 + +1.0 3,381,299 + +0.7 3,381,299 + +0.4 3,381,299 + +0.6 3,381,299 + +0.1 3,381,299 + +1.6 3,381,300 - -0.5 3,381,300 - +1.0 3,381,300 - +0.5 3,381,300 - +1.1 3,381,300 - +0.8 3,381,300 - +1.0 3,381,300 - +0.1 3,381,300 - -0.3 3,381,301 + -0.0 3,381,301 + +0.4 3,381,302 - +0.3 3,381,336 + -0.2 3,381,336 + +0.3 3,381,336 + -0.2 3,381,336 + -0.4 3,381,336 + +0.1 3,381,337 - -0.6 3,381,337 - -1.1 3,381,337 - -0.4 3,381,337 - +0.3 3,381,337 - -0.1 3,381,343 + -0.6 3,381,344 - +0.0 3,381,350 + +0.1 3,381,351 - +0.7 3,381,386 + +0.7 3,381,387 - -0.7 3,381,400 + -0.1 3,381,400 + +0.2 3,381,400 + +0.2 3,381,400 + -0.3 3,381,401 - +0.3 3,381,469 + -1.9 3,381,469 + -0.1 3,381,469 + +0.4 3,381,469 + +0.7 3,381,469 + +0.3 3,381,469 + -0.4 3,381,469 + -0.3 3,381,469 + -0.7 3,381,469 + +0.6 3,381,469 + +1.2 3,381,469 + +1.2 3,381,469 + -0.4 3,381,469 + +0.9 3,381,470 - -0.6 3,381,470 - +0.9 3,381,470 - +0.8 3,381,694 + ABZR86_RS15040 0.20 +0.6 3,381,694 + ABZR86_RS15040 0.20 +0.4 3,381,694 + ABZR86_RS15040 0.20 -0.0 3,381,694 + ABZR86_RS15040 0.20 +0.1 3,381,694 + ABZR86_RS15040 0.20 +0.6 3,381,694 + ABZR86_RS15040 0.20 +0.4 3,381,695 - ABZR86_RS15040 0.20 +1.0 3,381,695 - ABZR86_RS15040 0.20 +0.5 3,381,745 + ABZR86_RS15040 0.24 -0.0 3,381,745 + ABZR86_RS15040 0.24 +1.1 3,381,745 + ABZR86_RS15040 0.24 +0.4 3,381,745 + ABZR86_RS15040 0.24 -0.8 3,381,746 - ABZR86_RS15040 0.24 +0.5 3,381,746 - ABZR86_RS15040 0.24 -0.3 3,381,746 - ABZR86_RS15040 0.24 +0.7 3,381,746 - ABZR86_RS15040 0.24 -0.1 3,381,746 - ABZR86_RS15040 0.24 +0.8 3,381,746 - ABZR86_RS15040 0.24 +0.4 3,382,159 + ABZR86_RS15040 0.55 -0.1 3,382,159 + ABZR86_RS15040 0.55 +1.2 3,382,159 + ABZR86_RS15040 0.55 +0.3 3,382,159 + ABZR86_RS15040 0.55 +1.3 3,382,159 + ABZR86_RS15040 0.55 +0.3 3,382,159 + ABZR86_RS15040 0.55 +0.7 3,382,159 + ABZR86_RS15040 0.55 +3.9 3,382,159 + ABZR86_RS15040 0.55 +0.6 3,382,159 + ABZR86_RS15040 0.55 +1.1 3,382,159 + ABZR86_RS15040 0.55 +0.6 3,382,159 + ABZR86_RS15040 0.55 +0.2 3,382,159 + ABZR86_RS15040 0.55 +0.8 3,382,159 + ABZR86_RS15040 0.55 +0.7 3,382,160 - ABZR86_RS15040 0.55 -1.3 3,382,160 - ABZR86_RS15040 0.55 +1.6 3,382,160 - ABZR86_RS15040 0.55 +0.4 3,382,160 - ABZR86_RS15040 0.55 -0.3 3,382,160 - ABZR86_RS15040 0.55 +0.2 3,382,160 - ABZR86_RS15040 0.55 -0.3 3,382,160 - ABZR86_RS15040 0.55 +0.1 3,382,160 - ABZR86_RS15040 0.55 -0.6 3,382,160 - ABZR86_RS15040 0.55 -1.3 3,382,160 - ABZR86_RS15040 0.55 +0.3 3,382,160 - ABZR86_RS15040 0.55 +0.2 3,382,306 + ABZR86_RS15040 0.66 +0.7 3,382,306 + ABZR86_RS15040 0.66 +0.8 3,382,306 + ABZR86_RS15040 0.66 +0.5 3,382,307 - ABZR86_RS15040 0.66 +0.4 3,382,307 - ABZR86_RS15040 0.66 +1.0 3,382,307 - ABZR86_RS15040 0.66 -0.9 3,382,307 - ABZR86_RS15040 0.66 +0.1
Or see this region's nucleotide sequence