Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10095

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS10085 and ABZR86_RS10090 are separated by 176 nucleotidesABZR86_RS10090 and ABZR86_RS10095 overlap by 1 nucleotidesABZR86_RS10095 and ABZR86_RS10100 are separated by 7 nucleotidesABZR86_RS10100 and ABZR86_RS10105 are separated by 82 nucleotides ABZR86_RS10085: ABZR86_RS10085 - TonB-dependent receptor, at 2,239,191 to 2,242,049 _RS10085 ABZR86_RS10090: ABZR86_RS10090 - TPM domain-containing protein, at 2,242,226 to 2,242,729 _RS10090 ABZR86_RS10095: ABZR86_RS10095 - TPM domain-containing protein, at 2,242,729 to 2,243,622 _RS10095 ABZR86_RS10100: ABZR86_RS10100 - LemA family protein, at 2,243,630 to 2,244,250 _RS10100 ABZR86_RS10105: ABZR86_RS10105 - diacylglycerol kinase, at 2,244,333 to 2,244,707 _RS10105 Position (kb) 2242 2243 2244Strain fitness (log2 ratio) -2 -1 0 1at 2241.747 kb on + strand, within ABZR86_RS10085at 2241.748 kb on - strand, within ABZR86_RS10085at 2241.774 kb on + strandat 2241.774 kb on + strandat 2241.775 kb on - strandat 2241.775 kb on - strandat 2241.775 kb on - strandat 2241.775 kb on - strandat 2241.807 kb on + strandat 2241.807 kb on + strandat 2241.807 kb on + strandat 2241.807 kb on + strandat 2241.807 kb on + strandat 2241.807 kb on + strandat 2241.807 kb on + strandat 2241.808 kb on - strandat 2241.808 kb on - strandat 2241.808 kb on - strandat 2241.808 kb on - strandat 2241.884 kb on + strandat 2241.884 kb on + strandat 2241.948 kb on + strandat 2241.948 kb on + strandat 2241.949 kb on - strandat 2241.949 kb on - strandat 2241.949 kb on - strandat 2241.951 kb on + strandat 2241.951 kb on + strandat 2241.951 kb on + strandat 2241.951 kb on + strandat 2241.952 kb on - strandat 2241.952 kb on - strandat 2241.952 kb on - strandat 2241.952 kb on - strandat 2241.952 kb on - strandat 2241.952 kb on - strandat 2241.952 kb on - strandat 2241.954 kb on + strandat 2241.954 kb on + strandat 2241.954 kb on + strandat 2241.954 kb on + strandat 2241.954 kb on + strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.955 kb on - strandat 2241.990 kb on + strandat 2241.990 kb on + strandat 2241.990 kb on + strandat 2242.017 kb on + strandat 2242.023 kb on + strandat 2242.023 kb on + strandat 2242.032 kb on + strandat 2242.032 kb on + strandat 2242.033 kb on - strandat 2242.033 kb on - strandat 2242.033 kb on - strandat 2242.033 kb on - strandat 2242.047 kb on + strandat 2242.048 kb on - strandat 2242.122 kb on + strandat 2242.209 kb on + strandat 2242.209 kb on + strandat 2242.209 kb on + strandat 2242.210 kb on - strandat 2242.210 kb on - strandat 2242.227 kb on + strandat 2242.228 kb on - strandat 2242.228 kb on - strandat 2242.464 kb on + strand, within ABZR86_RS10090at 2242.464 kb on + strand, within ABZR86_RS10090at 2242.465 kb on - strand, within ABZR86_RS10090at 2242.465 kb on - strand, within ABZR86_RS10090at 2242.465 kb on - strand, within ABZR86_RS10090at 2243.186 kb on + strand, within ABZR86_RS10095at 2243.186 kb on + strand, within ABZR86_RS10095at 2243.190 kb on - strand, within ABZR86_RS10095at 2243.190 kb on - strand, within ABZR86_RS10095at 2243.219 kb on + strand, within ABZR86_RS10095at 2243.219 kb on + strand, within ABZR86_RS10095at 2243.381 kb on + strand, within ABZR86_RS10095at 2243.381 kb on + strand, within ABZR86_RS10095at 2243.381 kb on + strand, within ABZR86_RS10095at 2243.381 kb on + strand, within ABZR86_RS10095at 2243.382 kb on - strand, within ABZR86_RS10095at 2243.382 kb on - strand, within ABZR86_RS10095at 2243.382 kb on - strand, within ABZR86_RS10095at 2243.382 kb on - strand, within ABZR86_RS10095at 2243.382 kb on - strand, within ABZR86_RS10095at 2243.790 kb on + strand, within ABZR86_RS10100at 2243.790 kb on + strand, within ABZR86_RS10100at 2243.790 kb on + strand, within ABZR86_RS10100at 2243.790 kb on + strand, within ABZR86_RS10100at 2243.790 kb on + strand, within ABZR86_RS10100at 2243.790 kb on + strand, within ABZR86_RS10100at 2243.791 kb on - strand, within ABZR86_RS10100at 2243.791 kb on - strand, within ABZR86_RS10100at 2243.791 kb on - strand, within ABZR86_RS10100at 2243.791 kb on - strand, within ABZR86_RS10100at 2243.811 kb on + strand, within ABZR86_RS10100at 2243.811 kb on + strand, within ABZR86_RS10100at 2243.811 kb on + strand, within ABZR86_RS10100at 2243.901 kb on + strand, within ABZR86_RS10100at 2243.901 kb on + strand, within ABZR86_RS10100at 2243.902 kb on - strand, within ABZR86_RS10100at 2243.902 kb on - strand, within ABZR86_RS10100at 2243.902 kb on - strand, within ABZR86_RS10100at 2244.126 kb on + strand, within ABZR86_RS10100at 2244.189 kb on + strandat 2244.189 kb on + strandat 2244.190 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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2,241,747 + ABZR86_RS10085 0.89 -0.4
2,241,748 - ABZR86_RS10085 0.89 -0.7
2,241,774 + -0.3
2,241,774 + +0.1
2,241,775 - -0.5
2,241,775 - -1.1
2,241,775 - -0.7
2,241,775 - -0.6
2,241,807 + +0.5
2,241,807 + -0.8
2,241,807 + -2.0
2,241,807 + +0.1
2,241,807 + -0.2
2,241,807 + -1.5
2,241,807 + -1.4
2,241,808 - -1.0
2,241,808 - -0.2
2,241,808 - +0.0
2,241,808 - -0.5
2,241,884 + -0.6
2,241,884 + +0.1
2,241,948 + -0.8
2,241,948 + -1.0
2,241,949 - -0.3
2,241,949 - -1.0
2,241,949 - +0.2
2,241,951 + -0.9
2,241,951 + -0.1
2,241,951 + -0.9
2,241,951 + -0.9
2,241,952 - -0.3
2,241,952 - +0.5
2,241,952 - -0.7
2,241,952 - -0.2
2,241,952 - +0.5
2,241,952 - -0.4
2,241,952 - +0.2
2,241,954 + -0.1
2,241,954 + -0.1
2,241,954 + -0.9
2,241,954 + -0.1
2,241,954 + -0.7
2,241,955 - -0.2
2,241,955 - -1.0
2,241,955 - +0.0
2,241,955 - -0.2
2,241,955 - -0.9
2,241,955 - -0.2
2,241,955 - +0.2
2,241,955 - -0.8
2,241,990 + -0.0
2,241,990 + -1.6
2,241,990 + +0.2
2,242,017 + -0.7
2,242,023 + +0.8
2,242,023 + -0.3
2,242,032 + +0.0
2,242,032 + -1.8
2,242,033 - -0.4
2,242,033 - +0.0
2,242,033 - -0.3
2,242,033 - -0.7
2,242,047 + -1.7
2,242,048 - -1.0
2,242,122 + +0.4
2,242,209 + -0.0
2,242,209 + -0.8
2,242,209 + -0.4
2,242,210 - -2.0
2,242,210 - +0.1
2,242,227 + +0.6
2,242,228 - -0.5
2,242,228 - -0.3
2,242,464 + ABZR86_RS10090 0.47 +0.3
2,242,464 + ABZR86_RS10090 0.47 -0.2
2,242,465 - ABZR86_RS10090 0.47 -0.2
2,242,465 - ABZR86_RS10090 0.47 +0.8
2,242,465 - ABZR86_RS10090 0.47 -0.6
2,243,186 + ABZR86_RS10095 0.51 -0.3
2,243,186 + ABZR86_RS10095 0.51 +0.7
2,243,190 - ABZR86_RS10095 0.52 +0.1
2,243,190 - ABZR86_RS10095 0.52 -0.6
2,243,219 + ABZR86_RS10095 0.55 +0.3
2,243,219 + ABZR86_RS10095 0.55 +0.8
2,243,381 + ABZR86_RS10095 0.73 +0.9
2,243,381 + ABZR86_RS10095 0.73 +0.4
2,243,381 + ABZR86_RS10095 0.73 -0.3
2,243,381 + ABZR86_RS10095 0.73 +0.7
2,243,382 - ABZR86_RS10095 0.73 -0.3
2,243,382 - ABZR86_RS10095 0.73 +1.3
2,243,382 - ABZR86_RS10095 0.73 -0.1
2,243,382 - ABZR86_RS10095 0.73 -2.7
2,243,382 - ABZR86_RS10095 0.73 -0.3
2,243,790 + ABZR86_RS10100 0.26 +1.6
2,243,790 + ABZR86_RS10100 0.26 +0.9
2,243,790 + ABZR86_RS10100 0.26 -0.1
2,243,790 + ABZR86_RS10100 0.26 +0.2
2,243,790 + ABZR86_RS10100 0.26 +0.1
2,243,790 + ABZR86_RS10100 0.26 -0.3
2,243,791 - ABZR86_RS10100 0.26 +0.2
2,243,791 - ABZR86_RS10100 0.26 -0.1
2,243,791 - ABZR86_RS10100 0.26 +1.0
2,243,791 - ABZR86_RS10100 0.26 -0.2
2,243,811 + ABZR86_RS10100 0.29 +1.2
2,243,811 + ABZR86_RS10100 0.29 -0.6
2,243,811 + ABZR86_RS10100 0.29 +0.4
2,243,901 + ABZR86_RS10100 0.44 -0.5
2,243,901 + ABZR86_RS10100 0.44 -0.6
2,243,902 - ABZR86_RS10100 0.44 +0.2
2,243,902 - ABZR86_RS10100 0.44 +1.0
2,243,902 - ABZR86_RS10100 0.44 -0.4
2,244,126 + ABZR86_RS10100 0.80 -0.1
2,244,189 + -0.1
2,244,189 + +0.1
2,244,190 - -0.2

Or see this region's nucleotide sequence