Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS09145 and ABZR86_RS09150 are separated by 2 nucleotides ABZR86_RS09150 and ABZR86_RS09155 are separated by 144 nucleotides ABZR86_RS09155 and ABZR86_RS09160 overlap by 4 nucleotides
ABZR86_RS09145: ABZR86_RS09145 - hypothetical protein, at 2,032,159 to 2,032,809
_RS09145
ABZR86_RS09150: ABZR86_RS09150 - sigma-70 family RNA polymerase sigma factor, at 2,032,812 to 2,033,324
_RS09150
ABZR86_RS09155: ABZR86_RS09155 - DUF502 domain-containing protein, at 2,033,469 to 2,034,140
_RS09155
ABZR86_RS09160: ABZR86_RS09160 - M14 family metallopeptidase, at 2,034,137 to 2,035,918
_RS09160
Position (kb)
2033
2034
2035 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2032.560 kb on - strand, within ABZR86_RS09145 at 2032.560 kb on - strand, within ABZR86_RS09145 at 2032.918 kb on + strand, within ABZR86_RS09150 at 2032.918 kb on + strand, within ABZR86_RS09150 at 2032.919 kb on - strand, within ABZR86_RS09150 at 2033.298 kb on + strand at 2033.299 kb on - strand at 2033.299 kb on - strand at 2033.299 kb on - strand at 2033.431 kb on + strand at 2033.431 kb on + strand at 2033.493 kb on + strand at 2033.494 kb on - strand at 2033.494 kb on - strand at 2033.703 kb on + strand, within ABZR86_RS09155 at 2033.703 kb on + strand, within ABZR86_RS09155 at 2033.703 kb on + strand, within ABZR86_RS09155 at 2033.704 kb on - strand, within ABZR86_RS09155 at 2033.958 kb on + strand, within ABZR86_RS09155 at 2033.958 kb on + strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2033.959 kb on - strand, within ABZR86_RS09155 at 2034.062 kb on + strand, within ABZR86_RS09155 at 2034.063 kb on - strand, within ABZR86_RS09155 at 2034.110 kb on + strand at 2034.111 kb on - strand at 2034.111 kb on - strand at 2034.246 kb on - strand at 2034.246 kb on - strand at 2034.246 kb on - strand at 2034.263 kb on + strand at 2034.263 kb on + strand at 2034.659 kb on + strand, within ABZR86_RS09160 at 2034.659 kb on + strand, within ABZR86_RS09160 at 2034.660 kb on - strand, within ABZR86_RS09160 at 2034.660 kb on - strand, within ABZR86_RS09160 at 2034.660 kb on - strand, within ABZR86_RS09160 at 2034.761 kb on + strand, within ABZR86_RS09160 at 2034.768 kb on - strand, within ABZR86_RS09160 at 2034.782 kb on + strand, within ABZR86_RS09160 at 2034.893 kb on + strand, within ABZR86_RS09160 at 2035.028 kb on + strand, within ABZR86_RS09160 at 2035.028 kb on + strand, within ABZR86_RS09160 at 2035.028 kb on + strand, within ABZR86_RS09160 at 2035.029 kb on - strand, within ABZR86_RS09160 at 2035.029 kb on - strand, within ABZR86_RS09160 at 2035.029 kb on - strand, within ABZR86_RS09160 at 2035.052 kb on + strand, within ABZR86_RS09160 at 2035.052 kb on + strand, within ABZR86_RS09160 at 2035.052 kb on + strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160 at 2035.053 kb on - strand, within ABZR86_RS09160
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,032,560 - ABZR86_RS09145 0.62 -1.6 2,032,560 - ABZR86_RS09145 0.62 -3.3 2,032,918 + ABZR86_RS09150 0.21 +0.1 2,032,918 + ABZR86_RS09150 0.21 +0.0 2,032,919 - ABZR86_RS09150 0.21 +0.4 2,033,298 + +0.2 2,033,299 - +1.5 2,033,299 - +0.1 2,033,299 - -1.0 2,033,431 + -0.7 2,033,431 + +0.1 2,033,493 + -0.3 2,033,494 - +0.7 2,033,494 - +0.3 2,033,703 + ABZR86_RS09155 0.35 +0.3 2,033,703 + ABZR86_RS09155 0.35 +0.1 2,033,703 + ABZR86_RS09155 0.35 -0.2 2,033,704 - ABZR86_RS09155 0.35 +0.4 2,033,958 + ABZR86_RS09155 0.73 -0.3 2,033,958 + ABZR86_RS09155 0.73 +0.4 2,033,959 - ABZR86_RS09155 0.73 +1.2 2,033,959 - ABZR86_RS09155 0.73 -0.1 2,033,959 - ABZR86_RS09155 0.73 -1.0 2,033,959 - ABZR86_RS09155 0.73 -1.0 2,033,959 - ABZR86_RS09155 0.73 -0.5 2,033,959 - ABZR86_RS09155 0.73 -0.2 2,034,062 + ABZR86_RS09155 0.88 -0.7 2,034,063 - ABZR86_RS09155 0.88 -0.0 2,034,110 + +1.6 2,034,111 - +0.1 2,034,111 - +0.2 2,034,246 - +0.7 2,034,246 - -0.1 2,034,246 - -0.2 2,034,263 + +0.2 2,034,263 + -0.0 2,034,659 + ABZR86_RS09160 0.29 -0.3 2,034,659 + ABZR86_RS09160 0.29 +0.8 2,034,660 - ABZR86_RS09160 0.29 +1.0 2,034,660 - ABZR86_RS09160 0.29 +0.4 2,034,660 - ABZR86_RS09160 0.29 -0.2 2,034,761 + ABZR86_RS09160 0.35 -0.2 2,034,768 - ABZR86_RS09160 0.35 +0.4 2,034,782 + ABZR86_RS09160 0.36 +0.4 2,034,893 + ABZR86_RS09160 0.42 +0.6 2,035,028 + ABZR86_RS09160 0.50 +0.2 2,035,028 + ABZR86_RS09160 0.50 +0.2 2,035,028 + ABZR86_RS09160 0.50 +1.4 2,035,029 - ABZR86_RS09160 0.50 -0.1 2,035,029 - ABZR86_RS09160 0.50 -0.2 2,035,029 - ABZR86_RS09160 0.50 +2.3 2,035,052 + ABZR86_RS09160 0.51 -0.8 2,035,052 + ABZR86_RS09160 0.51 +0.2 2,035,052 + ABZR86_RS09160 0.51 +0.9 2,035,053 - ABZR86_RS09160 0.51 -0.4 2,035,053 - ABZR86_RS09160 0.51 -0.0 2,035,053 - ABZR86_RS09160 0.51 -0.3 2,035,053 - ABZR86_RS09160 0.51 +0.5
Or see this region's nucleotide sequence