Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS08075

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS08070 and ABZR86_RS08075 are separated by 10 nucleotidesABZR86_RS08075 and ABZR86_RS08080 overlap by 4 nucleotidesABZR86_RS08080 and ABZR86_RS08085 are separated by 211 nucleotides ABZR86_RS08070: ABZR86_RS08070 - helicase HerA-like domain-containing protein, at 1,802,447 to 1,803,943 _RS08070 ABZR86_RS08075: ABZR86_RS08075 - hypothetical protein, at 1,803,954 to 1,805,213 _RS08075 ABZR86_RS08080: ABZR86_RS08080 - transcription elongation factor GreB, at 1,805,210 to 1,805,707 _RS08080 ABZR86_RS08085: ABZR86_RS08085 - hypothetical protein, at 1,805,919 to 1,806,494 _RS08085 Position (kb) 1803 1804 1805 1806Strain fitness (log2 ratio) -3 -2 -1 0 1at 1803.149 kb on + strand, within ABZR86_RS08070at 1803.149 kb on + strand, within ABZR86_RS08070at 1803.149 kb on + strand, within ABZR86_RS08070at 1803.149 kb on + strand, within ABZR86_RS08070at 1803.149 kb on + strand, within ABZR86_RS08070at 1803.150 kb on - strand, within ABZR86_RS08070at 1803.313 kb on - strand, within ABZR86_RS08070at 1803.338 kb on + strand, within ABZR86_RS08070at 1803.338 kb on + strand, within ABZR86_RS08070at 1803.339 kb on - strand, within ABZR86_RS08070at 1803.339 kb on - strand, within ABZR86_RS08070at 1803.570 kb on + strand, within ABZR86_RS08070at 1803.570 kb on + strand, within ABZR86_RS08070at 1803.668 kb on + strand, within ABZR86_RS08070at 1803.668 kb on + strand, within ABZR86_RS08070at 1803.669 kb on - strand, within ABZR86_RS08070at 1803.669 kb on - strand, within ABZR86_RS08070at 1803.669 kb on - strand, within ABZR86_RS08070at 1803.983 kb on + strandat 1803.984 kb on - strandat 1804.021 kb on - strandat 1804.062 kb on - strandat 1804.074 kb on + strandat 1804.074 kb on + strandat 1804.074 kb on + strandat 1804.075 kb on - strandat 1804.075 kb on - strandat 1804.075 kb on - strandat 1804.075 kb on - strandat 1804.143 kb on + strand, within ABZR86_RS08075at 1804.431 kb on + strand, within ABZR86_RS08075at 1804.431 kb on + strand, within ABZR86_RS08075at 1804.431 kb on + strand, within ABZR86_RS08075at 1804.530 kb on + strand, within ABZR86_RS08075at 1804.530 kb on + strand, within ABZR86_RS08075at 1804.530 kb on + strand, within ABZR86_RS08075at 1804.530 kb on + strand, within ABZR86_RS08075at 1804.531 kb on - strand, within ABZR86_RS08075at 1804.531 kb on - strand, within ABZR86_RS08075at 1804.531 kb on - strand, within ABZR86_RS08075at 1804.531 kb on - strand, within ABZR86_RS08075at 1804.542 kb on + strand, within ABZR86_RS08075at 1804.543 kb on - strand, within ABZR86_RS08075at 1804.543 kb on - strand, within ABZR86_RS08075at 1804.548 kb on + strand, within ABZR86_RS08075at 1804.548 kb on + strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.549 kb on - strand, within ABZR86_RS08075at 1804.780 kb on - strand, within ABZR86_RS08075at 1805.014 kb on - strand, within ABZR86_RS08075at 1805.014 kb on - strand, within ABZR86_RS08075at 1805.378 kb on + strand, within ABZR86_RS08080at 1805.378 kb on + strand, within ABZR86_RS08080at 1805.378 kb on + strand, within ABZR86_RS08080at 1805.379 kb on - strand, within ABZR86_RS08080at 1805.379 kb on - strand, within ABZR86_RS08080at 1805.379 kb on - strand, within ABZR86_RS08080at 1805.379 kb on - strand, within ABZR86_RS08080at 1805.379 kb on - strand, within ABZR86_RS08080at 1805.384 kb on + strand, within ABZR86_RS08080at 1805.384 kb on + strand, within ABZR86_RS08080at 1805.384 kb on + strand, within ABZR86_RS08080at 1805.385 kb on - strand, within ABZR86_RS08080at 1805.426 kb on + strand, within ABZR86_RS08080at 1805.546 kb on + strand, within ABZR86_RS08080at 1805.547 kb on - strand, within ABZR86_RS08080at 1805.547 kb on - strand, within ABZR86_RS08080at 1805.547 kb on - strand, within ABZR86_RS08080at 1805.622 kb on + strand, within ABZR86_RS08080at 1805.623 kb on - strand, within ABZR86_RS08080at 1805.702 kb on + strandat 1805.702 kb on + strandat 1805.703 kb on - strandat 1805.770 kb on + strandat 1805.807 kb on + strandat 1805.807 kb on + strandat 1805.807 kb on + strandat 1805.920 kb on + strandat 1805.920 kb on + strandat 1805.920 kb on + strandat 1805.920 kb on + strandat 1805.921 kb on - strandat 1805.921 kb on - strandat 1805.990 kb on + strand, within ABZR86_RS08085at 1805.991 kb on - strand, within ABZR86_RS08085at 1806.154 kb on + strand, within ABZR86_RS08085at 1806.154 kb on + strand, within ABZR86_RS08085at 1806.154 kb on + strand, within ABZR86_RS08085at 1806.154 kb on + strand, within ABZR86_RS08085at 1806.154 kb on + strand, within ABZR86_RS08085at 1806.154 kb on + strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085at 1806.155 kb on - strand, within ABZR86_RS08085

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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1,803,149 + ABZR86_RS08070 0.47 +0.5
1,803,149 + ABZR86_RS08070 0.47 -0.9
1,803,149 + ABZR86_RS08070 0.47 +0.1
1,803,149 + ABZR86_RS08070 0.47 -1.2
1,803,149 + ABZR86_RS08070 0.47 -0.2
1,803,150 - ABZR86_RS08070 0.47 -0.1
1,803,313 - ABZR86_RS08070 0.58 +0.1
1,803,338 + ABZR86_RS08070 0.60 -2.2
1,803,338 + ABZR86_RS08070 0.60 -0.5
1,803,339 - ABZR86_RS08070 0.60 +0.7
1,803,339 - ABZR86_RS08070 0.60 +0.5
1,803,570 + ABZR86_RS08070 0.75 +0.2
1,803,570 + ABZR86_RS08070 0.75 -1.2
1,803,668 + ABZR86_RS08070 0.82 -0.5
1,803,668 + ABZR86_RS08070 0.82 -0.9
1,803,669 - ABZR86_RS08070 0.82 -0.0
1,803,669 - ABZR86_RS08070 0.82 +0.2
1,803,669 - ABZR86_RS08070 0.82 +0.3
1,803,983 + -0.4
1,803,984 - -0.3
1,804,021 - +0.4
1,804,062 - +0.3
1,804,074 + +0.0
1,804,074 + +0.2
1,804,074 + -0.6
1,804,075 - -0.8
1,804,075 - -1.2
1,804,075 - +0.1
1,804,075 - -0.2
1,804,143 + ABZR86_RS08075 0.15 -0.9
1,804,431 + ABZR86_RS08075 0.38 +0.0
1,804,431 + ABZR86_RS08075 0.38 -1.0
1,804,431 + ABZR86_RS08075 0.38 +0.5
1,804,530 + ABZR86_RS08075 0.46 +0.2
1,804,530 + ABZR86_RS08075 0.46 +0.5
1,804,530 + ABZR86_RS08075 0.46 +0.5
1,804,530 + ABZR86_RS08075 0.46 +0.7
1,804,531 - ABZR86_RS08075 0.46 -2.9
1,804,531 - ABZR86_RS08075 0.46 -0.2
1,804,531 - ABZR86_RS08075 0.46 -1.8
1,804,531 - ABZR86_RS08075 0.46 -0.6
1,804,542 + ABZR86_RS08075 0.47 -0.8
1,804,543 - ABZR86_RS08075 0.47 -0.6
1,804,543 - ABZR86_RS08075 0.47 +0.1
1,804,548 + ABZR86_RS08075 0.47 -0.0
1,804,548 + ABZR86_RS08075 0.47 +1.1
1,804,549 - ABZR86_RS08075 0.47 +0.9
1,804,549 - ABZR86_RS08075 0.47 +1.6
1,804,549 - ABZR86_RS08075 0.47 +0.4
1,804,549 - ABZR86_RS08075 0.47 +0.0
1,804,549 - ABZR86_RS08075 0.47 -0.0
1,804,549 - ABZR86_RS08075 0.47 -0.3
1,804,549 - ABZR86_RS08075 0.47 +0.4
1,804,549 - ABZR86_RS08075 0.47 +0.0
1,804,780 - ABZR86_RS08075 0.66 +1.0
1,805,014 - ABZR86_RS08075 0.84 +0.5
1,805,014 - ABZR86_RS08075 0.84 +0.3
1,805,378 + ABZR86_RS08080 0.34 +0.3
1,805,378 + ABZR86_RS08080 0.34 -0.5
1,805,378 + ABZR86_RS08080 0.34 +0.4
1,805,379 - ABZR86_RS08080 0.34 +0.4
1,805,379 - ABZR86_RS08080 0.34 -0.9
1,805,379 - ABZR86_RS08080 0.34 +0.2
1,805,379 - ABZR86_RS08080 0.34 +0.0
1,805,379 - ABZR86_RS08080 0.34 +0.3
1,805,384 + ABZR86_RS08080 0.35 +0.1
1,805,384 + ABZR86_RS08080 0.35 +0.5
1,805,384 + ABZR86_RS08080 0.35 +0.1
1,805,385 - ABZR86_RS08080 0.35 +0.4
1,805,426 + ABZR86_RS08080 0.43 +0.8
1,805,546 + ABZR86_RS08080 0.67 -0.3
1,805,547 - ABZR86_RS08080 0.68 +0.4
1,805,547 - ABZR86_RS08080 0.68 -0.3
1,805,547 - ABZR86_RS08080 0.68 -0.8
1,805,622 + ABZR86_RS08080 0.83 +0.5
1,805,623 - ABZR86_RS08080 0.83 -0.1
1,805,702 + -0.9
1,805,702 + -1.2
1,805,703 - +1.5
1,805,770 + +1.4
1,805,807 + -0.1
1,805,807 + -0.7
1,805,807 + +0.6
1,805,920 + -1.6
1,805,920 + -0.3
1,805,920 + -0.8
1,805,920 + -0.1
1,805,921 - -0.2
1,805,921 - -0.0
1,805,990 + ABZR86_RS08085 0.12 +0.8
1,805,991 - ABZR86_RS08085 0.12 +0.6
1,806,154 + ABZR86_RS08085 0.41 -0.9
1,806,154 + ABZR86_RS08085 0.41 +1.5
1,806,154 + ABZR86_RS08085 0.41 -0.0
1,806,154 + ABZR86_RS08085 0.41 +0.1
1,806,154 + ABZR86_RS08085 0.41 +0.1
1,806,154 + ABZR86_RS08085 0.41 -0.3
1,806,155 - ABZR86_RS08085 0.41 -0.2
1,806,155 - ABZR86_RS08085 0.41 +0.8
1,806,155 - ABZR86_RS08085 0.41 +0.0
1,806,155 - ABZR86_RS08085 0.41 -0.5
1,806,155 - ABZR86_RS08085 0.41 +0.3
1,806,155 - ABZR86_RS08085 0.41 +0.3
1,806,155 - ABZR86_RS08085 0.41 +0.4
1,806,155 - ABZR86_RS08085 0.41 -0.4

Or see this region's nucleotide sequence