Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS00275

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS00270 and ABZR86_RS00275 are separated by 63 nucleotidesABZR86_RS00275 and ABZR86_RS00280 are separated by 415 nucleotides ABZR86_RS00270: ABZR86_RS00270 - serine hydrolase, at 48,310 to 49,953 _RS00270 ABZR86_RS00275: ABZR86_RS00275 - alpha/beta hydrolase-fold protein, at 50,017 to 51,636 _RS00275 ABZR86_RS00280: ABZR86_RS00280 - DUF3761 domain-containing protein, at 52,052 to 52,567 _RS00280 Position (kb) 50 51 52Strain fitness (log2 ratio) -1 0 1at 49.028 kb on - strand, within ABZR86_RS00270at 49.028 kb on - strand, within ABZR86_RS00270at 49.028 kb on - strand, within ABZR86_RS00270at 49.138 kb on + strand, within ABZR86_RS00270at 49.138 kb on + strand, within ABZR86_RS00270at 49.139 kb on - strand, within ABZR86_RS00270at 49.489 kb on + strand, within ABZR86_RS00270at 49.649 kb on - strand, within ABZR86_RS00270at 50.110 kb on + strandat 50.110 kb on + strandat 50.369 kb on - strand, within ABZR86_RS00275at 50.405 kb on - strand, within ABZR86_RS00275at 50.405 kb on - strand, within ABZR86_RS00275at 50.410 kb on + strand, within ABZR86_RS00275at 50.410 kb on + strand, within ABZR86_RS00275at 50.410 kb on + strand, within ABZR86_RS00275at 50.410 kb on + strand, within ABZR86_RS00275at 50.410 kb on + strand, within ABZR86_RS00275at 50.411 kb on - strand, within ABZR86_RS00275at 50.643 kb on + strand, within ABZR86_RS00275at 50.644 kb on - strand, within ABZR86_RS00275at 50.644 kb on - strand, within ABZR86_RS00275at 50.644 kb on - strand, within ABZR86_RS00275at 50.710 kb on + strand, within ABZR86_RS00275at 50.710 kb on + strand, within ABZR86_RS00275at 50.711 kb on - strand, within ABZR86_RS00275at 50.711 kb on - strand, within ABZR86_RS00275at 50.749 kb on + strand, within ABZR86_RS00275at 50.770 kb on + strand, within ABZR86_RS00275at 50.770 kb on + strand, within ABZR86_RS00275at 50.771 kb on - strand, within ABZR86_RS00275at 50.771 kb on - strand, within ABZR86_RS00275at 50.771 kb on - strand, within ABZR86_RS00275at 50.771 kb on - strand, within ABZR86_RS00275at 50.926 kb on + strand, within ABZR86_RS00275at 51.088 kb on + strand, within ABZR86_RS00275at 51.089 kb on - strand, within ABZR86_RS00275at 51.212 kb on - strand, within ABZR86_RS00275at 51.325 kb on + strand, within ABZR86_RS00275at 51.436 kb on + strand, within ABZR86_RS00275at 51.436 kb on + strand, within ABZR86_RS00275at 51.437 kb on - strand, within ABZR86_RS00275at 51.437 kb on - strand, within ABZR86_RS00275at 51.536 kb on - strandat 51.536 kb on - strandat 51.536 kb on - strandat 51.536 kb on - strandat 51.589 kb on + strandat 51.590 kb on - strandat 51.590 kb on - strandat 51.590 kb on - strandat 51.590 kb on - strandat 51.590 kb on - strandat 51.845 kb on + strandat 51.846 kb on - strandat 51.943 kb on + strandat 51.944 kb on - strandat 51.944 kb on - strandat 51.944 kb on - strandat 52.077 kb on + strandat 52.078 kb on - strandat 52.169 kb on + strand, within ABZR86_RS00280at 52.170 kb on - strand, within ABZR86_RS00280at 52.170 kb on - strand, within ABZR86_RS00280at 52.172 kb on - strand, within ABZR86_RS00280at 52.230 kb on - strand, within ABZR86_RS00280at 52.454 kb on + strand, within ABZR86_RS00280at 52.454 kb on + strand, within ABZR86_RS00280at 52.455 kb on - strand, within ABZR86_RS00280at 52.478 kb on + strand, within ABZR86_RS00280at 52.502 kb on + strand, within ABZR86_RS00280at 52.502 kb on + strand, within ABZR86_RS00280at 52.503 kb on - strand, within ABZR86_RS00280at 52.503 kb on - strand, within ABZR86_RS00280

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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49,028 - ABZR86_RS00270 0.44 -0.4
49,028 - ABZR86_RS00270 0.44 +0.1
49,028 - ABZR86_RS00270 0.44 +0.7
49,138 + ABZR86_RS00270 0.50 -1.4
49,138 + ABZR86_RS00270 0.50 +1.1
49,139 - ABZR86_RS00270 0.50 +0.5
49,489 + ABZR86_RS00270 0.72 +0.5
49,649 - ABZR86_RS00270 0.81 +0.7
50,110 + +0.7
50,110 + +0.2
50,369 - ABZR86_RS00275 0.22 -0.1
50,405 - ABZR86_RS00275 0.24 -1.3
50,405 - ABZR86_RS00275 0.24 +0.6
50,410 + ABZR86_RS00275 0.24 +1.0
50,410 + ABZR86_RS00275 0.24 +0.5
50,410 + ABZR86_RS00275 0.24 -0.5
50,410 + ABZR86_RS00275 0.24 +0.2
50,410 + ABZR86_RS00275 0.24 +0.3
50,411 - ABZR86_RS00275 0.24 -0.1
50,643 + ABZR86_RS00275 0.39 +1.0
50,644 - ABZR86_RS00275 0.39 +1.2
50,644 - ABZR86_RS00275 0.39 +0.1
50,644 - ABZR86_RS00275 0.39 +0.4
50,710 + ABZR86_RS00275 0.43 +0.3
50,710 + ABZR86_RS00275 0.43 -0.9
50,711 - ABZR86_RS00275 0.43 +0.8
50,711 - ABZR86_RS00275 0.43 +0.3
50,749 + ABZR86_RS00275 0.45 +0.7
50,770 + ABZR86_RS00275 0.46 -0.7
50,770 + ABZR86_RS00275 0.46 -0.2
50,771 - ABZR86_RS00275 0.47 -0.4
50,771 - ABZR86_RS00275 0.47 +1.1
50,771 - ABZR86_RS00275 0.47 +0.7
50,771 - ABZR86_RS00275 0.47 +0.9
50,926 + ABZR86_RS00275 0.56 +0.3
51,088 + ABZR86_RS00275 0.66 +0.3
51,089 - ABZR86_RS00275 0.66 +0.5
51,212 - ABZR86_RS00275 0.74 +0.2
51,325 + ABZR86_RS00275 0.81 -1.4
51,436 + ABZR86_RS00275 0.88 +0.2
51,436 + ABZR86_RS00275 0.88 +1.4
51,437 - ABZR86_RS00275 0.88 +0.4
51,437 - ABZR86_RS00275 0.88 +0.7
51,536 - +0.3
51,536 - -1.0
51,536 - -0.9
51,536 - -0.2
51,589 + +0.1
51,590 - +0.3
51,590 - -0.5
51,590 - +0.9
51,590 - +0.3
51,590 - -0.5
51,845 + +0.0
51,846 - -0.8
51,943 + +0.8
51,944 - +0.6
51,944 - +0.1
51,944 - -0.3
52,077 + +0.7
52,078 - -1.3
52,169 + ABZR86_RS00280 0.23 -1.1
52,170 - ABZR86_RS00280 0.23 -0.3
52,170 - ABZR86_RS00280 0.23 +0.7
52,172 - ABZR86_RS00280 0.23 +0.6
52,230 - ABZR86_RS00280 0.34 +0.2
52,454 + ABZR86_RS00280 0.78 -0.3
52,454 + ABZR86_RS00280 0.78 -0.2
52,455 - ABZR86_RS00280 0.78 -0.9
52,478 + ABZR86_RS00280 0.83 -1.1
52,502 + ABZR86_RS00280 0.87 -0.6
52,502 + ABZR86_RS00280 0.87 +0.2
52,503 - ABZR86_RS00280 0.87 +0.8
52,503 - ABZR86_RS00280 0.87 +0.4

Or see this region's nucleotide sequence