Strain Fitness in Sinorhizobium meliloti 1021 around SMc04462

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
3,094,874	+				-0.6
3,094,875	-				+3.0
3,094,875	-				-0.4
3,094,911	+				-0.7
3,094,911	+				+0.2
3,094,912	-				-0.5
3,094,935	-				+0.5
3,094,966	-				+1.0
3,094,966	-				+0.6
3,094,981	-				+1.2
3,095,072	-				+0.1
3,095,072	-				+1.1
3,095,075	-				+0.8
3,095,168	+		SMc03943	0.10	+1.2
3,095,168	+		SMc03943	0.10	-1.4
3,095,169	-		SMc03943	0.10	+0.0
3,095,312	+		SMc03943	0.29	+0.5
3,095,313	-		SMc03943	0.29	-0.4
3,095,433	+		SMc03943	0.45	-0.1
3,095,434	-		SMc03943	0.46	+0.9
3,095,434	-		SMc03943	0.46	-0.2
3,095,822	+				-0.2
3,095,823	-				+0.2
3,095,823	-				-2.7
3,095,843	+				+0.3
3,095,844	-				-1.9
3,095,844	-				-0.0
3,095,860	-				-0.1
3,096,244	-		SMc04462	0.41	-1.1
3,096,264	-		SMc04462	0.44	-1.8
3,096,264	-		SMc04462	0.44	+0.1
3,096,538	-		SMc04462	0.72	-2.0
3,096,538	-		SMc04462	0.72	-0.8
3,097,277	-		SMc02975	0.38	+0.4
3,097,303	-		SMc02975	0.41	+1.7
3,097,410	+		SMc02975	0.51	+0.6
3,097,677	+		SMc02975	0.77	+0.6
3,097,677	+		SMc02975	0.77	-0.1
3,097,678	-		SMc02975	0.77	+1.5
3,097,678	-		SMc02975	0.77	+1.1
3,097,678	-		SMc02975	0.77	+1.3
3,097,758	+		SMc02975	0.85	+0.2