Strain Fitness in Sinorhizobium meliloti 1021 around SMc04351

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
2,233,396	+		SMc04350	0.50	-0.4
2,233,408	+		SMc04350	0.51	-1.5
2,233,408	+		SMc04350	0.51	+2.0
2,233,408	+		SMc04350	0.51	+0.5
2,233,409	-		SMc04350	0.51	-0.3
2,233,579	+		SMc04350	0.64	-0.4
2,233,579	+		SMc04350	0.64	-0.6
2,233,580	-		SMc04350	0.64	-1.4
2,233,580	-		SMc04350	0.64	-3.4
2,233,675	+		SMc04350	0.72	-0.2
2,233,675	+		SMc04350	0.72	-1.3
2,233,675	+		SMc04350	0.72	+0.7
2,233,676	-		SMc04350	0.72	+0.4
2,233,676	-		SMc04350	0.72	-1.8
2,234,055	+				-0.9
2,234,117	+				-0.8
2,234,117	+				-0.4
2,234,117	+				-2.5
2,234,117	+				-0.6
2,234,117	+				+1.5
2,234,117	+				-0.6
2,234,117	+				-3.1
2,234,117	+				-1.1
2,234,118	-				-1.2
2,234,118	-				-0.9
2,234,118	-				-1.2
2,234,118	-				-1.0
2,234,118	-				-0.0
2,234,118	-				-1.4
2,234,118	-				+0.6
2,234,118	-				-1.1
2,234,118	-				-0.2
2,234,118	-				-0.8
2,234,118	-				+0.5
2,234,118	-				-1.7
2,234,118	-				-2.5
2,234,118	-				+0.6
2,234,119	+				-0.0
2,234,120	-				-1.4
2,234,120	-				-2.8
2,234,120	-				+1.8
2,234,120	-				-1.2
2,234,120	-				-1.4
2,234,120	-				+0.1
2,234,129	+				-1.4
2,234,232	+				-1.2
2,234,232	+				-0.7
2,234,232	+				-0.1
2,234,233	-				-0.8
2,234,233	-				-3.0
2,234,322	+		SMc04351	0.15	-0.6
2,234,323	-		SMc04351	0.15	-0.5
2,234,849	+		SMc04351	0.42	+1.0
2,235,132	+		SMc04351	0.56	-1.1
2,235,231	+		SMc04351	0.61	-0.5
2,235,231	+		SMc04351	0.61	-1.5
2,235,232	-		SMc04351	0.61	-0.6
2,235,232	-		SMc04351	0.61	-1.5
2,235,232	-		SMc04351	0.61	-3.2
2,235,232	-		SMc04351	0.61	-0.4
2,235,232	-		SMc04351	0.61	-1.4
2,235,306	+		SMc04351	0.65	-0.0
2,235,306	+		SMc04351	0.65	-1.1
2,235,306	+		SMc04351	0.65	-1.5
2,235,487	+		SMc04351	0.74	-1.5
2,235,488	-		SMc04351	0.74	-1.8
2,235,488	-		SMc04351	0.74	-0.9
2,235,745	+		SMc04351	0.88	-0.6
2,235,745	+		SMc04351	0.88	-1.6
2,235,746	-		SMc04351	0.88	-1.6
2,235,746	-		SMc04351	0.88	-1.0
2,235,828	+				+1.4
2,235,837	-				-0.8
2,236,079	+				+1.2
2,236,080	-				+0.2
2,236,080	-				+0.1
2,236,109	-		SMc04352	0.12	+0.3
2,236,109	-		SMc04352	0.12	-2.2
2,236,112	+				+2.4
2,236,112	+		SMc04352	0.12	+0.4
2,236,112	+		SMc04352	0.12	-0.5
2,236,113	-		SMc04352	0.12	+0.1
2,236,114	+		SMc04352	0.12	-1.9
2,236,114	+		SMc04352	0.12	+0.4
2,236,115	-		SMc04352	0.13	-0.0
2,236,310	-		SMc04352	0.46	-1.0
2,236,538	+		SMc04352	0.84	-0.4
2,236,539	-		SMc04352	0.84	+1.4
2,236,658	-				+1.3
2,236,661	+				+1.1
2,236,661	+				+0.2
2,236,662	-				+0.5
2,236,662	-				-0.3
2,236,671	+				-1.2
2,236,672	-				+0.6
2,236,846	-				+1.5
2,236,897	-		SMc04357	0.14	+0.1