Strain Fitness in Sinorhizobium meliloti 1021 around SMc04212

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
2,039,321	+				-0.1
2,039,461	+		SMc04211	0.33	+0.9
2,039,470	+		SMc04211	0.35	+0.7
2,039,470	+		SMc04211	0.35	+0.4
2,039,470	+		SMc04211	0.35	+0.7
2,039,470	+		SMc04211	0.35	+0.1
2,039,470	+		SMc04211	0.35	-1.5
2,039,700	+				+2.0
2,039,701	-		SMc04211	0.74	-0.4
2,039,802	+				+0.4
2,039,802	+				+0.0
2,039,804	+				+0.3
2,039,804	+				-0.8
2,039,805	-				+1.0
2,039,805	-				-0.1
2,039,805	-				-0.0
2,039,805	-				-0.5
2,039,806	+				+0.5
2,040,099	+				+0.2
2,040,099	+				-0.0
2,040,099	+				-0.6
2,040,100	-				-0.2
2,040,100	-				-0.5
2,040,100	-				-0.4
2,040,365	+		SMc04212	0.15	-1.3
2,040,366	-		SMc04212	0.15	-1.2
2,040,366	-		SMc04212	0.15	-0.7
2,040,366	-		SMc04212	0.15	-2.3
2,040,366	-		SMc04212	0.15	-0.2
2,040,366	-		SMc04212	0.15	-1.8
2,040,663	-		SMc04212	0.34	-0.1
2,040,663	-		SMc04212	0.34	+0.1
2,040,666	-		SMc04212	0.35	+0.1
2,040,812	-		SMc04212	0.44	-1.9
2,040,822	+		SMc04212	0.45	+1.0
2,040,822	+		SMc04212	0.45	+0.0
2,040,823	-		SMc04212	0.45	-1.9
2,040,931	-		SMc04212	0.52	-0.7
2,041,006	-		SMc04212	0.57	-1.3
2,041,040	+		SMc04212	0.59	+0.8
2,041,041	-		SMc04212	0.59	-0.7
2,041,376	+		SMc04212	0.81	+0.6
2,041,722	+				-0.5
2,041,722	+				-0.1
2,041,729	+				-0.2
2,041,729	+				+0.1
2,041,730	-				-1.7
2,041,730	-				-0.9
2,041,906	+		SMc04213	0.50	+1.4
2,041,907	-		SMc04213	0.50	-1.4
2,042,021	-		SMc04213	0.78	-1.5
2,042,093	+				+1.1
2,042,093	+				+1.4
2,042,094	-				+0.5
2,042,253	+				-0.1
2,042,254	-				+0.8
2,042,272	+				-0.4
2,042,273	-				-1.0
2,042,331	+				-2.0
2,042,332	-				+2.4