Strain Fitness in Sinorhizobium meliloti 1021 around SMc02357

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
2,777,934	+		SMc02356	0.38	+0.1
2,777,995	+		SMc02356	0.43	-2.5
2,777,996	-		SMc02356	0.43	-0.3
2,777,996	-		SMc02356	0.43	+0.3
2,777,996	-		SMc02356	0.43	+0.4
2,777,996	-		SMc02356	0.43	-1.0
2,778,022	+		SMc02356	0.45	+0.1
2,778,022	+		SMc02356	0.45	+1.1
2,778,023	-		SMc02356	0.45	+1.0
2,778,023	-		SMc02356	0.45	+0.3
2,778,024	+		SMc02356	0.45	-0.4
2,778,025	-		SMc02356	0.45	-0.5
2,778,025	-		SMc02356	0.45	+0.6
2,778,025	-		SMc02356	0.45	-0.5
2,778,025	-		SMc02356	0.45	-1.1
2,778,097	+		SMc02356	0.51	-1.3
2,778,097	+		SMc02356	0.51	-0.7
2,778,098	-		SMc02356	0.51	+0.4
2,778,098	-		SMc02356	0.51	+0.6
2,778,098	-		SMc02356	0.51	-0.7
2,778,185	-		SMc02356	0.59	+0.1
2,778,262	+		SMc02356	0.65	-1.7
2,778,262	+		SMc02356	0.65	-0.2
2,778,316	+		SMc02356	0.70	+1.2
2,778,316	+		SMc02356	0.70	+0.2
2,778,316	+		SMc02356	0.70	-0.7
2,778,317	-		SMc02356	0.70	-0.9
2,778,317	-		SMc02356	0.70	+2.4
2,778,330	+		SMc02356	0.71	-1.7
2,778,383	-		SMc02356	0.76	-3.1
2,778,383	-		SMc02356	0.76	+1.3
2,778,439	-		SMc02356	0.81	+0.5
2,778,640	-				+0.2
2,778,657	+				-0.1
2,778,984	-		SMc02357	0.36	-0.8
2,778,984	-		SMc02357	0.36	-0.1
2,778,999	+		SMc02357	0.38	+0.8
2,778,999	+		SMc02357	0.38	+0.2
2,778,999	+		SMc02357	0.38	+0.9
2,778,999	+		SMc02357	0.38	+0.4
2,779,000	-		SMc02357	0.38	+0.3
2,779,138	+		SMc02357	0.57	+0.1
2,779,138	+		SMc02357	0.57	+1.2
2,779,139	-		SMc02357	0.57	-0.8
2,779,139	-		SMc02357	0.57	-0.0
2,779,139	-		SMc02357	0.57	+1.5
2,779,423	+				-0.8
2,779,423	+				-0.6
2,779,423	+				+0.9
2,779,424	-				+0.0
2,779,455	+				-0.5
2,779,456	-				-0.0
2,779,476	-				-0.3
2,779,476	-				+1.3
2,780,138	+				+0.6
2,780,139	-				-1.2
2,780,139	-				+0.4
2,780,208	-				-0.7
2,780,208	-				-0.2
2,780,240	+				-0.2
2,780,240	+				+0.8
2,780,241	-				-0.2
2,780,241	-				-2.2
2,780,270	+		SMc02359	0.13	-0.4
2,780,298	-		SMc02359	0.16	-0.1
2,780,393	+		SMc02359	0.27	-0.2
2,780,394	-		SMc02359	0.27	+0.2
2,780,394	-		SMc02359	0.27	-0.2