Strain Fitness in Sinorhizobium meliloti 1021 around SMc02339

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
2,759,285	+				-0.7
2,759,285	+				+0.4
2,759,285	+				-0.6
2,759,375	+		SMc02338	0.12	-0.6
2,759,376	-		SMc02338	0.12	+1.8
2,759,376	-		SMc02338	0.12	+0.3
2,759,998	-		SMc02338	0.76	-2.4
2,760,228	+				-0.7
2,760,229	-				-0.2
2,760,229	-				+0.8
2,760,229	-				-0.2
2,760,239	+				+2.0
2,760,239	+				-2.5
2,760,240	-				-0.7
2,760,240	-				+0.4
2,760,289	+				-1.3
2,760,296	+				-0.6
2,760,296	+				-1.5
2,760,297	-				-0.3
2,760,550	+		SMc02339	0.35	-0.5
2,760,550	+		SMc02339	0.35	-0.3
2,760,550	+		SMc02339	0.35	-0.6
2,760,551	-		SMc02339	0.35	+1.4
2,760,551	-		SMc02339	0.35	-0.3
2,760,572	+		SMc02339	0.37	+0.0
2,760,573	-		SMc02339	0.38	+0.3
2,760,687	-		SMc02339	0.52	+0.0
2,760,687	-		SMc02339	0.52	-0.9
2,760,687	-		SMc02339	0.52	+0.8
2,760,687	-		SMc02339	0.52	-2.2
2,760,687	-		SMc02339	0.52	-0.9
2,760,811	+		SMc02339	0.68	+1.1
2,760,811	+		SMc02339	0.68	-0.8
2,760,811	+		SMc02339	0.68	-0.3
2,760,812	-		SMc02339	0.69	+0.2
2,760,812	-		SMc02339	0.69	-0.0
2,760,849	+		SMc02339	0.73	-0.4
2,760,849	+		SMc02339	0.73	-1.4
2,760,878	+		SMc02339	0.77	-0.6
2,760,879	-		SMc02339	0.77	-0.0
2,761,049	+				-0.5
2,761,050	-				+0.8
2,761,068	+				+1.0
2,761,068	+				-0.3
2,761,068	+				+0.3
2,761,069	-				-0.7
2,761,069	-				+0.5
2,761,069	-				+0.1
2,761,069	-				+0.2
2,761,069	-				-0.5
2,761,069	-				-0.0
2,761,224	+				-0.6
2,761,224	+				+0.1
2,761,225	-				+1.5
2,761,227	-				+0.7
2,761,316	+				-0.3
2,761,316	+				-1.5
2,761,324	+				-0.2
2,761,325	-				+0.6
2,761,372	-				+0.3
2,761,446	+				+0.8
2,761,472	+		SMc02340	0.11	+0.5
2,761,520	+		SMc02340	0.18	+0.4
2,761,520	+		SMc02340	0.18	-1.6
2,761,520	+		SMc02340	0.18	+0.6
2,761,521	-		SMc02340	0.18	-0.9
2,761,815	+		SMc02340	0.58	+0.3
2,761,889	+		SMc02340	0.68	+0.1
2,761,890	-		SMc02340	0.68	+0.2
2,761,890	-		SMc02340	0.68	-2.7
2,761,895	+		SMc02340	0.69	+0.8
2,761,895	+		SMc02340	0.69	+0.2
2,761,910	+		SMc02340	0.71	+0.5
2,761,912	+		SMc02340	0.71	-0.6
2,761,986	+		SMc02340	0.81	-0.6
2,761,986	+		SMc02340	0.81	+0.5
2,761,987	-		SMc02340	0.81	-1.0
2,762,006	+		SMc02340	0.84	+0.3
2,762,006	+		SMc02340	0.84	-2.4
2,762,006	+		SMc02340	0.84	-1.6
2,762,006	+		SMc02340	0.84	+2.2
2,762,006	+		SMc02340	0.84	-3.4
2,762,007	-		SMc02340	0.84	+0.4
2,762,007	-		SMc02340	0.84	-1.7
2,762,033	+		SMc02340	0.87	-0.6
2,762,033	+		SMc02340	0.87	-0.3
2,762,033	+		SMc02340	0.87	+0.8