Strain Fitness in Sinorhizobium meliloti 1021 around SMc02306
Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
679,273 | + | -0.1 | |||
679,274 | - | +1.7 | |||
679,329 | + | +0.0 | |||
679,329 | + | +0.4 | |||
679,329 | + | -0.6 | |||
679,330 | - | -0.3 | |||
679,484 | + | SMc02306 | 0.22 | -1.1 | |
680,047 | - | SMc02307 | 0.12 | +0.8 | |
680,062 | + | SMc02307 | 0.13 | +1.6 | |
680,075 | + | SMc02307 | 0.14 | -2.7 | |
680,143 | + | SMc02307 | 0.19 | -0.9 | |
680,217 | + | SMc02307 | 0.25 | -0.8 | |
680,218 | - | SMc02307 | 0.25 | -2.1 | |
680,218 | - | SMc02307 | 0.25 | +0.5 | |
680,280 | + | SMc02307 | 0.30 | +1.5 | |
680,280 | + | SMc02307 | 0.30 | -0.4 | |
680,281 | - | SMc02307 | 0.30 | -3.1 | |
680,281 | - | SMc02307 | 0.30 | +0.1 | |
680,445 | + | SMc02307 | 0.42 | +1.4 | |
680,484 | + | SMc02307 | 0.45 | -0.4 | |
680,539 | - | SMc02307 | 0.50 | -1.5 |
Or see this region's nucleotide sequence