Strain Fitness in Sinorhizobium meliloti 1021 around SMc02030

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
2,734,031	+		SMc02029	0.47	+0.2
2,734,031	+		SMc02029	0.47	-0.2
2,734,032	-		SMc02029	0.47	-0.7
2,734,032	-		SMc02029	0.47	-1.3
2,734,316	-		SMc02029	0.77	+0.1
2,734,316	-		SMc02029	0.77	-0.7
2,734,519	-				+0.6
2,734,525	+				-0.1
2,734,621	-				+0.9
2,734,630	-				-0.6
2,734,699	+				-0.6
2,734,700	-				+1.0
2,734,864	-		SMc02030	0.17	-1.7
2,734,875	+		SMc02030	0.18	-0.4
2,734,875	+		SMc02030	0.18	+0.9
2,734,917	+		SMc02030	0.23	+0.0
2,734,917	+		SMc02030	0.23	+0.2
2,734,917	+		SMc02030	0.23	-3.0
2,734,917	+		SMc02030	0.23	-0.2
2,734,918	-		SMc02030	0.23	+0.2
2,734,918	-		SMc02030	0.23	+0.2
2,734,955	+		SMc02030	0.27	+3.9
2,734,955	+		SMc02030	0.27	-1.3
2,734,956	-		SMc02030	0.27	+0.0
2,734,956	-		SMc02030	0.27	+0.1
2,734,956	-		SMc02030	0.27	+0.8
2,734,968	-		SMc02030	0.29	+0.4
2,734,968	-		SMc02030	0.29	+0.6
2,735,271	+		SMc02030	0.62	-0.4
2,735,271	+		SMc02030	0.62	+0.0
2,735,272	-		SMc02030	0.62	+2.1
2,735,727	-				+0.7
2,735,764	-				+0.4
2,735,764	-				+0.8
2,735,795	+				-0.7
2,735,795	+				-0.5
2,735,796	-				+1.6
2,735,844	-				+0.5
2,735,867	+				+0.3
2,735,867	+				-0.2
2,735,868	-				+0.6
2,735,868	-				+0.3
2,736,032	+		SMc02031	0.15	-0.1
2,736,033	-		SMc02031	0.15	+0.3
2,736,186	+		SMc02031	0.30	-0.3
2,736,186	+		SMc02031	0.30	+1.0
2,736,186	+		SMc02031	0.30	-0.1
2,736,187	-		SMc02031	0.30	+0.1
2,736,259	-		SMc02031	0.37	+0.1
2,736,259	-		SMc02031	0.37	+0.2
2,736,259	-		SMc02031	0.37	-2.6
2,736,294	+		SMc02031	0.40	-0.1
2,736,295	-		SMc02031	0.40	-2.3