Strain Fitness in Sinorhizobium meliloti 1021 around SMc01584
Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,518,860 | + | SMc01583 | 0.69 | -0.2 | |
2,518,894 | - | SMc01583 | 0.72 | +1.1 | |
2,518,894 | - | SMc01583 | 0.72 | +0.2 | |
2,518,894 | - | SMc01583 | 0.72 | -0.6 | |
2,518,993 | - | SMc01583 | 0.80 | +0.3 | |
2,519,050 | - | SMc01583 | 0.85 | -0.3 | |
2,519,363 | + | +0.2 | |||
2,519,599 | + | SMc01584 | 0.20 | -1.1 | |
2,519,728 | + | SMc01584 | 0.34 | -0.7 | |
2,519,729 | + | SMc01584 | 0.34 | -0.5 | |
2,519,729 | + | SMc01584 | 0.34 | -1.3 | |
2,519,729 | + | SMc01584 | 0.34 | -2.0 | |
2,519,729 | + | SMc01584 | 0.34 | -0.4 | |
2,519,730 | - | SMc01584 | 0.34 | -0.6 | |
2,519,730 | - | SMc01584 | 0.34 | +0.8 | |
2,519,737 | - | SMc01584 | 0.35 | +0.7 | |
2,519,737 | - | SMc01584 | 0.35 | +0.3 | |
2,520,112 | - | SMc01584 | 0.77 | -1.5 | |
2,520,124 | + | SMc01584 | 0.78 | +0.1 | |
2,520,125 | - | SMc01584 | 0.78 | +0.6 | |
2,520,379 | + | +1.2 | |||
2,520,383 | - | +0.7 | |||
2,520,388 | + | +1.0 | |||
2,520,389 | - | -1.8 | |||
2,520,389 | - | +1.0 | |||
2,520,389 | - | -0.4 | |||
2,520,449 | - | -0.5 | |||
2,520,451 | - | +0.4 | |||
2,520,451 | - | +1.0 | |||
2,520,468 | + | +0.9 | |||
2,520,718 | - | +1.9 | |||
2,521,288 | - | +1.1 | |||
2,521,289 | + | +1.1 | |||
2,521,289 | + | +0.3 | |||
2,521,289 | + | -0.2 | |||
2,521,290 | - | +0.0 | |||
2,521,292 | - | +0.4 | |||
2,521,292 | - | -0.0 | |||
2,521,292 | - | -0.3 |
Or see this region's nucleotide sequence