Strain Fitness in Sinorhizobium meliloti 1021 around SMc01212

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
1,714,194	+		SMc01213	0.41	+0.3
1,714,195	-		SMc01213	0.41	+0.6
1,714,195	-		SMc01213	0.41	-0.8
1,714,195	-		SMc01213	0.41	-0.1
1,714,275	+		SMc01213	0.50	+1.4
1,714,275	+		SMc01213	0.50	-0.8
1,714,275	+		SMc01213	0.50	-0.2
1,714,275	+		SMc01213	0.50	+0.0
1,714,276	-		SMc01213	0.50	+0.0
1,714,276	-		SMc01213	0.50	-0.9
1,714,299	+		SMc01213	0.52	+0.8
1,714,300	-		SMc01213	0.52	+0.8
1,714,368	+		SMc01213	0.60	+0.1
1,714,368	+		SMc01213	0.60	+1.3
1,714,368	+		SMc01213	0.60	+0.4
1,714,368	+		SMc01213	0.60	+0.2
1,714,369	-		SMc01213	0.60	-0.1
1,714,369	-		SMc01213	0.60	+0.0
1,714,369	-		SMc01213	0.60	-1.3
1,714,369	-		SMc01213	0.60	-0.7
1,714,369	-		SMc01213	0.60	-0.2
1,714,527	+				+1.2
1,714,527	+		SMc01213	0.77	+1.3
1,714,528	-		SMc01213	0.77	-0.4
1,714,528	-		SMc01213	0.77	+0.5
1,714,629	+		SMc01213	0.88	+0.2
1,714,629	+		SMc01213	0.88	+1.5
1,714,629	+		SMc01213	0.88	+0.8
1,714,629	+		SMc01213	0.88	+1.5
1,714,630	-		SMc01213	0.88	-0.3
1,714,630	-		SMc01213	0.88	+0.1
1,714,630	-		SMc01213	0.88	+0.2
1,714,630	-		SMc01213	0.88	-0.8
1,714,962	-				-1.4
1,714,965	+				+0.1
1,714,966	-				+0.6
1,714,979	-				+0.6
1,715,006	+				+1.3
1,715,031	+				+0.7
1,715,031	+				-0.9
1,715,032	-				-1.7
1,715,037	+				+2.4
1,715,037	+				-0.1
1,715,038	-				+0.4
1,715,200	+				-0.0
1,715,201	-				+0.1
1,715,269	+		SMc01212	0.14	-0.5
1,715,302	-		SMc01212	0.16	-2.0
1,715,401	+		SMc01212	0.24	-0.3
1,715,401	+		SMc01212	0.24	+0.0
1,715,470	+		SMc01212	0.30	-0.3
1,715,606	-		SMc01212	0.41	-0.5
1,715,743	+		SMc01212	0.52	+0.3
1,715,762	+		SMc01212	0.53	+0.9
1,715,783	-		SMc01212	0.55	-1.8
1,715,783	-		SMc01212	0.55	-0.1
1,715,833	+		SMc01212	0.59	-0.1
1,715,833	+		SMc01212	0.59	-0.8
1,715,998	+		SMc01212	0.72	-0.3
1,716,029	-		SMc01212	0.75	+1.8
1,716,087	-		SMc01212	0.79	-0.4
1,716,087	-		SMc01212	0.79	-1.8
1,716,146	+		SMc01212	0.84	+0.7
1,716,146	+		SMc01212	0.84	+0.1
1,716,146	+		SMc01212	0.84	-0.0
1,716,147	-		SMc01212	0.84	-0.6
1,716,147	-		SMc01212	0.84	-0.2
1,716,147	-		SMc01212	0.84	-1.3
1,716,156	+		SMc01212	0.85	-2.8
1,716,355	-				-0.8
1,716,372	-				+0.5
1,716,372	-				-0.6
1,716,372	-				+0.4
1,716,582	+				+0.5
1,716,606	+				-0.5
1,716,606	+				-0.8
1,716,606	+				-0.8
1,716,606	+				-1.1
1,716,606	+				+0.4
1,716,731	-				+2.8
1,716,868	+				-1.0
1,716,868	+				-0.3
1,716,918	+				-1.9
1,716,918	+				-2.0
1,717,216	+		SMc01211	0.30	+0.3
1,717,312	+		SMc01211	0.37	-1.5
1,717,312	+		SMc01211	0.37	-0.2
1,717,312	+		SMc01211	0.37	+0.0
1,717,313	-		SMc01211	0.37	+0.3
1,717,313	-		SMc01211	0.37	+0.2