Strain Fitness in Sinorhizobium meliloti 1021 around SMc00534

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
1,927,343	+				-0.7
1,927,398	-				-0.4
1,927,441	+				+1.2
1,927,441	+				+0.7
1,927,441	+				+0.9
1,927,441	+				+0.6
1,927,442	-				-0.4
1,927,442	-				+0.2
1,927,499	+				-0.2
1,927,499	+				-1.6
1,927,499	+				+0.8
1,927,500	-				-0.6
1,927,500	-				-0.8
1,927,500	-				+1.0
1,927,550	-		SMc00535	0.11	-2.5
1,927,576	+		SMc00535	0.14	+0.8
1,927,628	+		SMc00535	0.20	+0.3
1,927,629	-		SMc00535	0.20	-0.8
1,927,679	-		SMc00535	0.26	+1.0
1,927,699	+		SMc00535	0.29	+0.6
1,927,728	-		SMc00535	0.32	-3.4
1,927,762	+		SMc00535	0.36	+0.8
1,927,763	-		SMc00535	0.37	+0.1
1,927,906	+		SMc00535	0.54	+1.4
1,927,906	+		SMc00535	0.54	+0.8
1,927,906	+		SMc00535	0.54	-0.5
1,927,906	+		SMc00535	0.54	-1.1
1,927,906	+		SMc00535	0.54	-2.4
1,928,529	+		SMc00534	0.26	+0.1
1,928,529	+		SMc00534	0.26	-1.0
1,928,530	-		SMc00534	0.26	-1.1
1,928,775	+		SMc00534	0.52	-1.7
1,928,775	+		SMc00534	0.52	-0.4
1,928,776	-		SMc00534	0.52	-1.9
1,928,776	-		SMc00534	0.52	-0.4
1,928,823	+		SMc00534	0.57	-0.3
1,928,823	+		SMc00534	0.57	-2.0
1,928,824	-		SMc00534	0.58	+0.3
1,928,940	+		SMc00534	0.70	+0.6
1,928,940	+		SMc00534	0.70	-0.4
1,928,941	-		SMc00534	0.70	-0.5
1,928,941	-		SMc00534	0.70	-1.8
1,929,299	+				-1.0
1,929,300	-				+0.5
1,929,630	+		SMc00486	0.19	+2.4
1,929,673	+		SMc00486	0.23	+0.1
1,929,673	+		SMc00486	0.23	-1.2
1,929,673	+		SMc00486	0.23	-0.3
1,929,673	+		SMc00486	0.23	+0.3
1,929,673	+		SMc00486	0.23	+0.5
1,929,674	-		SMc00486	0.23	+0.9
1,929,674	-		SMc00486	0.23	+0.9
1,929,810	+		SMc00486	0.38	+1.1
1,929,811	-		SMc00486	0.38	-0.2
1,929,954	+		SMc00486	0.53	-0.4
1,929,954	+		SMc00486	0.53	+0.3
1,930,023	-		SMc00486	0.60	-0.6
1,930,023	-		SMc00486	0.60	+0.6
1,930,136	+		SMc00486	0.72	+0.1