Strain Fitness in Sinorhizobium meliloti 1021 around SMc00302
Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,873,746 | - | SMc00300 | 0.88 | -0.9 | |
1,873,746 | - | SMc00300 | 0.88 | -2.0 | |
1,873,746 | - | SMc00300 | 0.88 | -0.3 | |
1,873,843 | - | -0.4 | |||
1,873,863 | + | -0.6 | |||
1,873,863 | + | -0.6 | |||
1,873,863 | + | -0.3 | |||
1,873,864 | - | +0.6 | |||
1,873,864 | - | +1.2 | |||
1,873,930 | - | +0.3 | |||
1,873,938 | - | +1.1 | |||
1,874,033 | - | -1.0 | |||
1,874,069 | - | -0.5 | |||
1,874,512 | - | +1.0 | |||
1,874,525 | + | +1.2 | |||
1,874,544 | - | +1.9 | |||
1,874,583 | + | +0.1 | |||
1,874,583 | + | +0.8 | |||
1,874,583 | + | +0.7 | |||
1,874,584 | - | +1.1 | |||
1,874,584 | - | +0.4 | |||
1,874,835 | + | SMc00302 | 0.56 | -3.6 | |
1,874,836 | - | SMc00302 | 0.56 | -2.6 |
Or see this region's nucleotide sequence