Strain Fitness in Sinorhizobium meliloti 1021 around SMc00142

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
2,026,436	+		SMc00197	0.75	-0.7
2,026,437	-		SMc00197	0.75	-0.1
2,026,437	-		SMc00197	0.75	+1.5
2,026,483	+		SMc00197	0.80	-2.4
2,026,484	-		SMc00197	0.80	+1.2
2,026,588	+				-0.1
2,026,589	-				-1.4
2,026,590	+				+1.8
2,026,590	+				-0.6
2,026,591	-				-0.3
2,026,591	-				+0.4
2,026,591	-				-0.4
2,026,591	-				+1.0
2,026,597	+				+0.0
2,026,598	-				-0.1
2,026,660	+				+0.3
2,026,661	-				-0.9
2,026,953	+		SMc00143	0.42	-1.8
2,027,213	+		SMc00143	0.81	-0.8
2,027,214	-		SMc00143	0.82	-0.4
2,027,311	+				-1.9
2,027,439	+		SMc00142	0.21	+0.3
2,027,439	+		SMc00142	0.21	+1.2
2,027,440	-		SMc00142	0.21	-0.7
2,027,441	+		SMc00142	0.21	-1.8
2,027,441	+		SMc00142	0.21	-0.5
2,027,441	+		SMc00142	0.21	+0.5
2,027,442	-		SMc00142	0.21	-1.2
2,027,506	-		SMc00142	0.33	-0.8
2,027,506	-		SMc00142	0.33	-0.1
2,027,536	+		SMc00142	0.39	+0.2
2,027,642	-		SMc00142	0.59	-3.2
2,027,642	-		SMc00142	0.59	-0.2
2,027,656	-		SMc00142	0.62	-1.4
2,027,656	-		SMc00142	0.62	+0.2
2,027,739	-		SMc00142	0.78	-0.0
2,027,739	-		SMc00142	0.78	-0.5
2,027,789	-		SMc00142	0.87	-0.6
2,027,906	-				+0.2
2,027,906	-				-0.2
2,027,918	+				-0.2
2,027,972	-				+0.4
2,027,982	+				+0.3
2,027,983	-				+2.6
2,027,983	-				-0.7
2,028,113	-				-1.2
2,028,294	+		SMc00141	0.16	-0.1
2,028,294	+		SMc00141	0.16	-0.0
2,028,295	-		SMc00141	0.16	-0.4
2,028,391	+		SMc00141	0.21	-0.2
2,028,391	+		SMc00141	0.21	+0.0
2,028,391	+		SMc00141	0.21	-0.4
2,028,391	+		SMc00141	0.21	+0.6
2,028,392	-		SMc00141	0.21	+0.6
2,028,436	+		SMc00141	0.23	+0.2
2,028,436	+		SMc00141	0.23	-1.1
2,028,436	+		SMc00141	0.23	+0.0
2,028,436	+		SMc00141	0.23	+0.1
2,028,437	-		SMc00141	0.23	+2.8
2,028,437	-		SMc00141	0.23	+0.0
2,028,437	-		SMc00141	0.23	-0.5
2,028,440	-		SMc00141	0.23	-0.9
2,028,473	+		SMc00141	0.25	-0.3
2,028,473	+		SMc00141	0.25	-0.6
2,028,474	-		SMc00141	0.25	+0.3
2,028,474	-		SMc00141	0.25	+1.1
2,028,475	+		SMc00141	0.25	+0.6
2,028,475	+		SMc00141	0.25	-0.2
2,028,475	+		SMc00141	0.25	-0.6
2,028,476	-		SMc00141	0.25	+1.0
2,028,476	-		SMc00141	0.25	-1.0
2,028,476	-		SMc00141	0.25	+0.1
2,028,533	+		SMc00141	0.28	+0.3
2,028,533	+		SMc00141	0.28	+0.3
2,028,533	+		SMc00141	0.28	-0.8
2,028,534	-		SMc00141	0.28	-0.1
2,028,534	-		SMc00141	0.28	-1.8
2,028,534	-		SMc00141	0.28	-0.1
2,028,536	+		SMc00141	0.28	+1.8
2,028,536	+		SMc00141	0.28	-0.0
2,028,537	-		SMc00141	0.28	+1.3
2,028,537	-		SMc00141	0.28	+0.0
2,028,577	+		SMc00141	0.30	-0.6
2,028,577	+		SMc00141	0.30	+1.6
2,028,578	-		SMc00141	0.30	-0.2
2,028,578	-		SMc00141	0.30	-0.2
2,028,578	-		SMc00141	0.30	-0.1
2,028,634	+		SMc00141	0.33	+1.4
2,028,634	+		SMc00141	0.33	+0.4
2,028,634	+		SMc00141	0.33	-1.3
2,028,634	+		SMc00141	0.33	+0.7
2,028,635	-		SMc00141	0.33	+0.8
2,028,635	-		SMc00141	0.33	+0.1
2,028,706	+		SMc00141	0.37	+0.1
2,028,707	-		SMc00141	0.37	-1.0
2,028,710	-		SMc00141	0.37	-1.4
2,028,845	+		SMc00141	0.43	-0.6
2,028,846	-		SMc00141	0.43	+0.3
2,028,846	-		SMc00141	0.43	-0.7