Strain Fitness in Sinorhizobium meliloti 1021 around SMa2217

Experiment: Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.004 mg/ml
1,240,614	+				+0.5
1,241,098	-		SMa2215	0.36	+0.7
1,241,098	-		SMa2215	0.36	-0.3
1,241,209	+		SMa2215	0.51	-0.1
1,241,210	-		SMa2215	0.51	-0.6
1,241,289	-		SMa2215	0.61	-0.1
1,241,289	-		SMa2215	0.61	+0.3
1,241,385	+		SMa2215	0.74	+0.1
1,241,784	+		SMa2217	0.13	+0.7
1,241,785	-		SMa2217	0.13	-0.3
1,241,959	-		SMa2217	0.26	-1.7
1,241,959	-		SMa2217	0.26	+0.5
1,241,982	+		SMa2217	0.28	-0.3
1,241,982	+		SMa2217	0.28	-0.0
1,241,983	-		SMa2217	0.28	-0.9
1,242,042	+		SMa2217	0.33	-0.1
1,242,043	-		SMa2217	0.33	+0.4
1,242,213	+		SMa2217	0.45	+2.3
1,242,214	-		SMa2217	0.46	-0.8
1,242,214	-		SMa2217	0.46	-0.4
1,242,292	+		SMa2217	0.51	-2.3
1,242,298	+		SMa2217	0.52	-0.8
1,242,299	-		SMa2217	0.52	-0.2
1,242,299	-		SMa2217	0.52	-0.5
1,242,299	-		SMa2217	0.52	-0.8
1,242,385	-		SMa2217	0.58	+2.7
1,242,387	+				-0.8
1,242,387	+		SMa2217	0.59	+1.5
1,242,387	+		SMa2217	0.59	+0.3
1,242,388	-		SMa2217	0.59	-0.4
1,242,388	-		SMa2217	0.59	-0.5
1,242,388	-		SMa2217	0.59	-0.3
1,242,388	-		SMa2217	0.59	+0.0
1,242,522	+		SMa2217	0.69	-2.8
1,242,523	-		SMa2217	0.69	-0.4
1,242,681	-		SMa2217	0.81	+2.4
1,242,709	-		SMa2217	0.83	-1.1
1,242,765	-		SMa2217	0.87	+0.3
1,243,105	-		SMa2219	0.28	-2.8
1,243,342	+		SMa2219	0.68	-0.0
1,243,343	-		SMa2219	0.68	-1.0
1,243,343	-		SMa2219	0.68	+0.4
1,243,397	+		SMa2219	0.77	-0.2
1,243,397	+		SMa2219	0.77	+0.7
1,243,397	+		SMa2219	0.77	-0.1
1,243,543	-				+0.4
1,243,756	-		SMa2221	0.32	-0.3
1,243,871	+		SMa2221	0.48	+0.1
1,243,871	+		SMa2221	0.48	-0.1
1,243,871	+		SMa2221	0.48	+0.1
1,243,871	+		SMa2221	0.48	+0.2
1,243,871	+		SMa2221	0.48	+0.4
1,243,872	-		SMa2221	0.48	+0.3
1,243,872	-		SMa2221	0.48	-2.1
1,243,872	-		SMa2221	0.48	-0.3
1,243,872	-		SMa2221	0.48	-0.3
1,243,872	-		SMa2221	0.48	+0.6
1,243,872	-		SMa2221	0.48	-0.5
1,243,872	-		SMa2221	0.48	+1.7
1,243,872	-		SMa2221	0.48	-1.7
1,243,872	-		SMa2221	0.48	+1.0