Strain Fitness in Sinorhizobium meliloti 1021 around SMa0850
Experiment: Sisomicin 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Sisomicin 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
466,723 | - | SMa0849 | 0.31 | -0.1 | |
466,909 | - | SMa0849 | 0.50 | -0.3 | |
467,176 | - | SMa0849 | 0.77 | -3.4 | |
467,223 | + | SMa0849 | 0.82 | +0.4 | |
467,303 | + | +0.6 | |||
467,434 | + | +1.2 | |||
467,434 | + | +0.1 | |||
467,435 | - | -0.4 | |||
467,464 | - | -0.0 | |||
467,648 | - | +3.0 | |||
467,655 | + | +0.6 | |||
467,733 | - | -0.1 | |||
467,754 | - | SMa0850 | 0.15 | -1.0 | |
467,813 | + | SMa0850 | 0.31 | -2.2 | |
467,814 | - | SMa0850 | 0.31 | -0.3 | |
467,814 | - | SMa0850 | 0.31 | +0.4 | |
467,814 | - | SMa0850 | 0.31 | -0.8 | |
467,879 | + | SMa0850 | 0.49 | -0.4 | |
467,879 | + | SMa0850 | 0.49 | -0.2 | |
467,947 | + | SMa0850 | 0.67 | +3.2 | |
468,044 | + | -1.9 | |||
468,133 | + | +0.5 | |||
468,230 | + | +1.4 | |||
468,621 | + | SMa0851 | 0.57 | +0.7 | |
468,627 | + | SMa0851 | 0.58 | +0.4 | |
468,627 | + | SMa0851 | 0.58 | -0.1 | |
468,628 | - | SMa0851 | 0.58 | +1.1 | |
468,793 | - | SMa0851 | 0.80 | -0.6 | |
468,813 | - | SMa0851 | 0.83 | +0.5 | |
468,960 | + | -0.8 | |||
468,990 | - | +1.6 | |||
469,012 | - | -0.9 | |||
469,012 | - | -0.5 | |||
469,034 | + | +1.2 | |||
469,049 | + | +1.0 | |||
469,049 | + | +0.8 | |||
469,050 | - | +2.2 | |||
469,055 | + | -0.8 | |||
469,055 | + | -0.7 | |||
469,056 | - | -0.1 |
Or see this region's nucleotide sequence